Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme06g01517 | ATGGAGAATTTAATGGGATTGTTGAGAATTCATGTGTTTAGAGGTGTGAATCTTGCTGTAAGAGATGTTTGTAGCAGTGATCCTTATGTTATTTTCAAGATGGGCAAACAGAAATTGAAGACTCGAGTAGTGAAGCAAAATATAAACCCAGAATGGAACGAAGATCTAACTCTATCAATCCAAGACCCAAGTCTCCCTGTCAACGTGCTTGTATACGACAAAGATCTGTTCTCGCTTGACGATAAGATGGGGGATGCGGAGTTTGACGTTCGGCCATTTGTGGAAGCCGTAAAGATGAGATTGAACAATCTCCCAAGTGGAACCATCATAAGAAAGATTCAACCAAGCAGGGAGAATTGTTTGTCCGAAGAAAGTTGCATAATTTGGGTAAATGGACAAGTTATTCAAAAAATGTTTCTAAGGTTAAGAAATGTGGAGTCCGGTGAAATTGAGCTGCAATTGCAATGGATTGATATTCCTGGCTCTAGAGGATTGTAG | 498 | 39.76 | MENLMGLLRIHVFRGVNLAVRDVCSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSIQDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPSGTIIRKIQPSRENCLSEESCIIWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL | 165 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 14634544 | 14636680 | - | MELO3C020261.2.1 | Cme06g01517 | 330666 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme06g01517 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| Cme06g01517 | 165 | Gene3D | C2 domain | 4 | 160 | IPR035892 | - | |
| Cme06g01517 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - | |
| Cme06g01517 | 165 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Cme06g01517 | 165 | CDD | C2_ArfGAP | 6 | 148 | - | - | |
| Cme06g01517 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Cme06g01517 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE | 1 | 164 | - | - | |
| Cme06g01517 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 91 | IPR035892 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme02g01681 | Cme-Chr2:23935345 | Cme06g01517 | Cme-Chr6:14634544 | 2.34E-85 | dispersed | |
| Cme06g01517 | Cme-Chr6:14634544 | Cme09g01378 | Cme-Chr9:19034438 | 6.68E-70 | dispersed | |
| Cme06g01517 | Cme-Chr6:14634544 | Cme12g01829 | Cme-Chr12:24675963 | 6.43E-86 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme06g01517 | - | - | csv:101218477 | 329.331 |