Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01675 ATGGCGATTATTATATTTCTAACAACACTTTTGGTGATTTTTATTTCATCACTTGCAAAGATTGCATATGATACAATCTCATGCTACTGGCTGACCCCAAGAAGAATCAGAAAGAAGATGGAAAAACAAGGTGTTCGTGGCCCCGTCCCTCGGCCGCTTGTCGGAAACATCCTTGACGTAGCAGCCCTTTTAGCAAAATCCACCGCCAAGGACATGAGCTCCATCGATCACAACATCGTCGACCGCCTATTGCCTCATTACACCACCTGGACAAAGCAATACGGAAAGAGGTTTATATATTGGAACGGGATGGAGCCGAGGCTATGTTTGGCGGAGACGGAATTGATAAAAGAAGTATTGAGTAAAAACAGTAATGTGTGTGGGAGATCATGGCTGCAAAGACAGGGAACCAAACATTTCATTGGGAAAGGATTGTTGATGGCAAATGGAGAAGATTGGTATCATCAACGACACATCGTTGCCCCTTCGTTTATGGGGGATAAACTCAAGAGCTATGCGGGGTTGATGGTGGAATGCACTGACAAATTGATCCAATCACTTGAGACCGAGCTTGACTCGGGCCGGACCGAGTTTGAAATCGCCGATTATATGAAACAACTCACCGCCGATATCATTTCTCGGACCGAGTTCGATGCTAATTCCGACAAGGGCAACCAAATCTTTCATTTGCTTACTCTTCTTCAGCACCTCTGTGCCCAAGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGGTTTTTTCCAAGTAAATACAACAGGGAAATAAAGTCACTAAAAATGGAGGTAGAGAGGTTATTAATGGAGATTATTCAAAGCAGAAAAGATGGTGTGGAGATTGGAAGAAGTACTTGCTATGGAAGTGATTTATTGGGAATGCTACTAAATGAAATGCAAAGGAAAAAAGATGATGGGGACAATGGTTTCAGCTTGAACTTGCAACTTATAATGGATGAATGCAAAACATTCTTCTTTGCTGGACATGAAACCACTGCCCTTTTGCTCACTTGGACCATCATGTTGCTTGCCACTAACCCTAATTGGCAACAAAAAGTTCGTCATGAAGTCAATCAAGTTTGCCATAATGGTGCTACTCCCTCTGTTGAACATCTCTCTAAGTTCACTTTGCTAAACATGGTAATAAACGAATCGCTAAGGCTATACCCACCGGCAACAGTGCTACCGAGAATGGCGTTCGAGGACATAAAGGTAGGAGATTTAGAGATACCAAAAGGTTTATCAATATGGATTCCAGTGCTAGCCATTCATCACAGTGAAGAGTTGTGGGGAAAAGATGTAAACGAGTTCAAACCAGAAAGATTTGCATCAAAACCATTCAGTGGTGGACGTTTCATTCCATTTGCAGCTGGACCAAGAAACTGCGTTGGCCAAGGCTTTGCATTGATGGAAGCTAAGATCATTTTGGCTATGCTTCTCTCTAAGTTTAGTTTCACTATTTCAGATTCTTATCGCCATGCTCCTGTTAGTGTTCTCACCATACAGCCTAAGTATGGAGTTCAAGTTTATTTGACTCCAATCAATTCTTATCAACCTTAA 1572 42.81 MAIIIFLTTLLVIFISSLAKIAYDTISCYWLTPRRIRKKMEKQGVRGPVPRPLVGNILDVAALLAKSTAKDMSSIDHNIVDRLLPHYTTWTKQYGKRFIYWNGMEPRLCLAETELIKEVLSKNSNVCGRSWLQRQGTKHFIGKGLLMANGEDWYHQRHIVAPSFMGDKLKSYAGLMVECTDKLIQSLETELDSGRTEFEIADYMKQLTADIISRTEFDANSDKGNQIFHLLTLLQHLCAQASRHLCLPGSRFFPSKYNREIKSLKMEVERLLMEIIQSRKDGVEIGRSTCYGSDLLGMLLNEMQRKKDDGDNGFSLNLQLIMDECKTFFFAGHETTALLLTWTIMLLATNPNWQQKVRHEVNQVCHNGATPSVEHLSKFTLLNMVINESLRLYPPATVLPRMAFEDIKVGDLEIPKGLSIWIPVLAIHHSEELWGKDVNEFKPERFASKPFSGGRFIPFAAGPRNCVGQGFALMEAKIILAMLLSKFSFTISDSYRHAPVSVLTIQPKYGVQVYLTPINSYQP 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18404540 18408673 + MELO3C023796.2.1 Cme06g01675 330824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01675 523 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 514 - -
Cme06g01675 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 514 - -
Cme06g01675 523 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 Pfam Cytochrome P450 87 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 Coils Coil 261 281 - -
Cme06g01675 523 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 SUPERFAMILY Cytochrome P450 47 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01675 523 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01675 Cme-Chr6:18404540 Cme09g00147 Cme-Chr9:1077161 0 dispersed
Cme09g01553 Cme-Chr9:20537686 Cme06g01675 Cme-Chr6:18404540 9.05E-104 dispersed
Cme06g01675 Cme-Chr6:18404540 Cme05g01942 Cme-Chr5:28013128 9.92E-113 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01675 K10717 - csv:101213604 1038.48