Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01704 ATGGCTGGGGGAGGAATGATCCGGCAATTGCTGAGAAAATTTTCATCTCAATCTTCAACCCCTCCATTGAACTCATCACTGATTTCAAAGAATCAGGAAGCTGGCTTTGCTGGGATGAACTCTTTTAGAAGGCTGGCTCTCCTTGGGGCAGGCGTTACAGGGTTTTTTAGTTTTGCAACTTTGGCATCTGCTGATGAGGCAGAGCATGGTTTGGAGTGTCCAAACTACCCTTGGCCTCACCAGGGCATTTTGAGTTCATACGATCATGCTTCGATTCGTCGTGGTCATCAGGTTTATCAACAAGTTTGTGCATCCTGTCATTCCATGTCTTTAATATCATACCGTGACTTGGTTGGTGTTGCATATACCGAAGAGGAGACAAAAGCAATGGCTGCTGAAATTGAGGTCGTTGATGGACCCAACGATGAGGGTGAGATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTCAACCATATGCAAATGAACAAGCTGCTAGATTTGCCAACGGTGGAGCATACCCTCCTGATCTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGTGTTTCGATCCGTGAGGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAGTATGAAGATGGTACCCCTGCCACAGAAGCACAGATGGGTAAAGATATTGTATCATTCTTGTCATGGGCCGCGGAACCAGAAATGGAAGAAAGAAAATTGATGGGATTCAAGTGGATCTTTGTGCTTTCTCTGGCCCTACTGCAGGCCGCATATTACCGCCGATTGAAGTGGTCAGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTAGTCAATTAG 924 46.21 MAGGGMIRQLLRKFSSQSSTPPLNSSLISKNQEAGFAGMNSFRRLALLGAGVTGFFSFATLASADEAEHGLECPNYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDIVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 19067993 19073207 + MELO3C014960.2.1 Cme06g01704 330853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01704 307 ProSiteProfiles Cytochrome c family profile. 90 197 IPR009056 GO:0009055|GO:0020037
Cme06g01704 307 Gene3D - 67 262 IPR036909 GO:0009055|GO:0020037
Cme06g01704 307 Pfam Cytochrome C1 family 78 294 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 SUPERFAMILY Cytochrome c 71 261 IPR036909 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 76 95 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 96 115 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 141 161 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 174 198 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 212 223 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 223 242 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 243 262 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PRINTS Cytochrome C1 signature 262 277 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 18 307 - -
Cme06g01704 307 Gene3D - 263 306 - -
Cme06g01704 307 PANTHER CYTOCHROME C1 18 307 IPR002326 GO:0009055|GO:0020037
Cme06g01704 307 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 262 306 IPR021157 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01704 Cme-Chr6:19067993 Cme07g01752 Cme-Chr7:23038966 3.07E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01704 K00413 - csv:101215010 611.298