Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g01785 | ATGGAGAATTATCAGATGTTTTTTCCTTGCTCCGATGGCGGCGGAGGACTGTCAGCCTATCATCATGCGGACATGTCATCCGGCGGTGCTTCTGATATGTTCGGTAATTTTCAGGGTGGCGATATGGAGGCGGTAAGTGGGTTTTTGGGGATGAAAAGAGAGGTGGATGGGGCGACGGTGGAAGCAGAGGGCGGTGGGAGAAAGAAGGGAGAGAAGAAGGTGAGGAAACCGAGATATGCTTTCCAGACAAGAAGCCAAGTTGACATTCTTGACGATGGGTATCGTTGGAGAAAATATGGTCAAAAAGCTGTAAAAAACAACAAGTTTCCTAGGAGCTATTATAGATGCACACATCAAGGGTGCAATGTGAAGAAACAAGTGCAAAGGCTAACAAGAGATGAAGGGGTGGTGGTGACAACATATGAAGGAATGCACACACACTCCATTGATAAGCCAACAGATAACTTTGAACAAATATTGAGTAGAATGCAGATTTATAGTACTCCTTTTTGA | 513 | 44.83 | MENYQMFFPCSDGGGGLSAYHHADMSSGGASDMFGNFQGGDMEAVSGFLGMKREVDGATVEAEGGGRKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF | 170 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 20817270 | 20820114 | + | MELO3C014896.2.1 | Cme06g01785 | 330934 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g01785 | 170 | ProSiteProfiles | WRKY domain profile. | 85 | 150 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cme06g01785 | 170 | SUPERFAMILY | WRKY DNA-binding domain | 82 | 149 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cme06g01785 | 170 | Gene3D | WRKY domain | 75 | 150 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cme06g01785 | 170 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 54 | 165 | - | - | |
Cme06g01785 | 170 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 54 | 165 | IPR044810 | GO:0003700 | |
Cme06g01785 | 170 | Pfam | WRKY DNA -binding domain | 91 | 147 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cme06g01785 | 170 | SMART | WRKY_cls | 90 | 149 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00112 | Cme-Chr3:1584861 | Cme06g01785 | Cme-Chr6:20817270 | 1.52E-53 | dispersed | |
Cme06g00148 | Cme-Chr6:896741 | Cme06g01785 | Cme-Chr6:20817270 | 4.58E-34 | dispersed | |
Cme06g01785 | Cme-Chr6:20817270 | Cme07g01915 | Cme-Chr7:24377154 | 6.72E-39 | dispersed | |
Cme06g01785 | Cme-Chr6:20817270 | Cme07g01613 | Cme-Chr7:21921994 | 9.18E-38 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41520 | PF03106 | WRKY | 3.30E-26 | CL0274 | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g01785 | - | - | csv:101219349 | 335.109 |