Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01817 ATGGGGAAGAACGAATTTCTGACACCTAAAGCAATCGCAAACAGAATTAAGGCAAAAGGGCTACAGAAGCTGAGATGGTATTGCCAGATGTGTCAAAAGCAGTGTCGGGATGAGAATGGCTTTAAATGTCACTGTATGAGTGAAAGCCACCAGCGCCAGATGCAGATCTTTGGCCAAAATCCCCATCGTATTGTTGAAGGCTACTCTGAAGAGTTCGAGAGTTCTTTCATGGAGCACATTAAGCGTAGCCATCGGTTCAGTCGTGTGGCAGCTACAGTTGTCTATAATGAATACATTAACGACAGACATCATATTCATATGAATTCAACGCAGTGGGCTACTCTTACTGAGTTTGTTAAACATTTGGGTCGAACTGGGCAATGTAAAGTAGAGGAAACTCCCAAGGGTTGGTTCATTACTTACATAGATAGAGATTCAGAGACGCTTTTTAAAGAGAGAATGAAGAACAAGAGGATGCGGGCTGATTTAGCTGAAGAAGAGAAGCAAGAGAGAGAGATAAAGAGGCAAATTGAGAGGGCTGAGCAATTAGCACCTTTGGCTTCTGCATCTGCCGAGCTTTTGGAGGCTGAACAAACAAGAGAGTTGAAATTAGAGAGTGGGGTTAAGCTAGGATTTGCTTTAGGAACAACATCAAAATTGAAGGAGAAGAAAGGAGAGAGTTCCAGGGTGGTTTTTGATGAGGATGAGACGTATGAAACTGCCAAGGGGAAACCTGAAGGGACTTCCAAAAACAGGATAGGTACTGGTGGTGGTCTGTCATCTTTGGAGGAATTGATGAAAGAAGAAGAGATGAAGAAGGAGAAGCTTAATAGGAAGGATTACTGGCTTTGTGATGGAATAATTGTAAAAATTATGAGCAAGGATTTGGCTGAGAAGGGGTACTATAAGCAGAAGGGAGTTGTGCGCAAAGTGATTGATAAATATGTTGGAGAGATTGAAATGCTTGACGGCAAGCATGTGTTGAGAGTTGATCAAGAAGAATTAGAAACAGTGATACCACAAATTGGTGGCTTAGTAAGGATAGTAAATGGCGCATATCGTGGATCAAATGCTAGGTTGTTAAGTGTTGACACCGATAAGTTTTGTGCTAAAGTGCAAATTGAGAAGGGTGTATACGATGGCAGGGTGCTTAAGGCTGTTGAATATGAAGATATTTGTAAACTTGCATCATAA 1194 41.62 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPHRIVEGYSEEFESSFMEHIKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKHLGRTGQCKVEETPKGWFITYIDRDSETLFKERMKNKRMRADLAEEEKQEREIKRQIERAEQLAPLASASAELLEAEQTRELKLESGVKLGFALGTTSKLKEKKGESSRVVFDEDETYETAKGKPEGTSKNRIGTGGGLSSLEELMKEEEMKKEKLNRKDYWLCDGIIVKIMSKDLAEKGYYKQKGVVRKVIDKYVGEIEMLDGKHVLRVDQEELETVIPQIGGLVRIVNGAYRGSNARLLSVDTDKFCAKVQIEKGVYDGRVLKAVEYEDICKLAS 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21241140 21242966 - MELO3C014877.2.1 Cme06g01817 330966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01817 397 MobiDBLite consensus disorder prediction 237 258 - -
Cme06g01817 397 Gene3D - 286 339 - -
Cme06g01817 397 CDD KOW_KIN17 342 395 IPR041995 -
Cme06g01817 397 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Cme06g01817 397 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
Cme06g01817 397 Coils Coil 259 279 - -
Cme06g01817 397 PANTHER BNAA05G13760D PROTEIN 1 396 - -
Cme06g01817 397 Gene3D - 340 396 IPR014722 -
Cme06g01817 397 Coils Coil 154 183 - -
Cme06g01817 397 Gene3D - 60 160 IPR038254 -
Cme06g01817 397 SMART Kin17_mid_2 52 178 IPR019447 -
Cme06g01817 397 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 396 IPR037321 -
Cme06g01817 397 Pfam KN17 SH3-like C-terminal domain 278 331 IPR041330 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01817 Cme-Chr6:21241140 Cme04g01443 Cme-Chr4:20517470 8.53E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01817 K13102 - csv:101216499 738.799