Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme06g01857 | ATGGGAAGGCGATCCATAAGGGTTGCACTTCTCGTCTTTTCTCTTCTTCTTTCTTTGCGACCCCACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGAATCAGGGTTCTAATTCTGCCAGTGGAAGTACTCCGAAGCAGGACTGGAACAATGCTCATGAGGTACATTGCTCGAGAGAAAGGAGTAGGGCGGCATGGAAAGTAATTGAGGAGTATCTAATGCCCTTCGTGGAAAAAAAGAAATACGAGATTTCTACTAAGTGCAGGCTTCACCCTGATAACGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTACGAAGAAAAGTATATCGATCAGCATTTTGACAATCGACACTATAATTTGCTCAATGTGAGTCGAAATAGATGCTTGGCCGATCTCTGTGGTGCATTGCACTGTGACCATGTGATTGATGCAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCCGCAAGAAATAAACATATGTGTGAGGGTCTTGCTGACAGCTGTTTTCCTGTCGATGAGGGAGCTTTGGCCAGCCATCTTCATGAATTCTTCCTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGTTCGGACGAGTGTGTTCTACATTGTTATTTCAGTTTTGACAATCCTTTTTGTTATGTTTTTCTATGTCTTCTTTTACTTGTATAACAGGGGAATGAGAACTCGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCTTAG | 837 | 42.89 | MGRRSIRVALLVFSLLLSLRPHTVSSTLPLQSLNQGSNSASGSTPKQDWNNAHEVHCSRERSRAAWKVIEEYLMPFVEKKKYEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQVRTSVFYIVISVLTILFVMFFYVFFYLYNRGMRTRPQVLKRLSQSGRKKKPS | 278 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 21888048 | 21891351 | - | MELO3C014840.2.1 | Cme06g01857 | 331006 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme06g01857 | 278 | MobiDBLite | consensus disorder prediction | 28 | 51 | - | - | |
| Cme06g01857 | 278 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 114 | 135 | IPR013087 | - | |
| Cme06g01857 | 278 | PANTHER | ZINC FINGER PROTEIN-RELATED | 11 | 278 | - | - | |
| Cme06g01857 | 278 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 11 | 278 | - | - | |
| Cme06g01857 | 278 | MobiDBLite | consensus disorder prediction | 28 | 53 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme02g02039 | Cme-Chr2:26444385 | Cme06g01857 | Cme-Chr6:21888048 | 3.99E-107 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme06g01857 | - | - | csv:101219582 | 554.288 |