Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01908 ATGGCCATCTCTGAAACTCAGTCATCTTCCTCTCTCATCCCTAATTTCCTCTACTCTTCTTCCTCCATTCCATTCCACACCATTCTCCACTCCACTCTTCCTTCTCAATCGCCATCACAATCCTTCTCCATTTCCATTAAGCCCTTCCCCATTCCTTCTCCCACCGAGCCCACCAAGAAATTGGAGATGTATTCCCCTGCTTTCTACGCCGCCTGTGCCTTCGGTGGAAGCCTCAGCTGTGGTCTCACTCACACCGCCCTCACTCCTCTCGATCTCGTCAAGTGTAATATGCAGATTGACCCGGTGAAATACAAGAACATTTCATCTGGTTTTGGAGTTTTGCTAAAGGAGCAAGGAATCAGGGGCCTCTTTAGGGGTTGGGCGCCAACTCTACTTGGTTATAGTGCTCAAGGTGCTTGCAAGTATGGCATATACGAATTCTTTAAGAAATACTATTCCGATATAGTGGGTCCTGAGTATTCAGTAAAGTACAAGACATTGATCTATCTTGCTGGTTCTGCGTCCGCTGAAGTGATTGCAGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAGACACAGCCAGGTTTTGCCAGAGGTTTGTCAGATGGCCTTCCTAAATTTGTTAGATCTGAAGGTGCTCTTGGGTTGTATAAGGGTATTGTTCCTCTGTGGGGACGTCAGATCCCATATACAATGATGAAGTTCGCAACATTTGAGAACTTGGTGGAACTTATCTACAAGCATGCAATCTCGAAGCCAAAGACGGAATGCAGCAGCGCATTGCAGCTTGGAGTCAGCTTTGCTGGTGGATATATTGCGGGCGTGTCTTGTGCTATAGTTTCTCATCCTGCGGATAATCTCGTCTCCTTTCTCAATAATGCTAAAGGGGCCACCGTTGGCGAGGCAATTCAGAAACTTGGATTATGGGGTCTCTTCACACGAGGGCTGCCTCTACGCATAGTCATGATTGGTACCCTCACTGGAGCTCAATGGGTTATCTATGACGCCTTCAAAGTTTCTGTTGGACTGCCAACAACCGGTGGGGTTGCTCCTCCCATTGCTGCATCCCCTGAACATACTACTGTAACTGCAACTGCAACTGCGTAG 1119 47.36 MAISETQSSSSLIPNFLYSSSSIPFHTILHSTLPSQSPSQSFSISIKPFPIPSPTEPTKKLEMYSPAFYAACAFGGSLSCGLTHTALTPLDLVKCNMQIDPVKYKNISSGFGVLLKEQGIRGLFRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIVGPEYSVKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHAISKPKTECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGEAIQKLGLWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVSVGLPTTGGVAPPIAASPEHTTVTATATA 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22670156 22675963 + MELO3C014803.2.1 Cme06g01908 331057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01908 372 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 360 - -
Cme06g01908 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cme06g01908 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Cme06g01908 372 Pfam Mitochondrial carrier protein 168 252 IPR018108 -
Cme06g01908 372 Pfam Mitochondrial carrier protein 69 153 IPR018108 -
Cme06g01908 372 Gene3D Mitochondrial carrier domain 69 345 IPR023395 -
Cme06g01908 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 360 IPR044677 GO:0005315|GO:1990547
Cme06g01908 372 SUPERFAMILY Mitochondrial carrier 69 340 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01928 Cme-Chr1:27628138 Cme06g01908 Cme-Chr6:22670156 3.98E-108 dispersed
Cme06g01908 Cme-Chr6:22670156 Cme09g01145 Cme-Chr9:16129838 0 dispersed
Cme06g01908 Cme-Chr6:22670156 Cme08g02449 Cme-Chr8:31357978 3.67E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01908 K15102 - csv:101203018 682.559