Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01960 ATGGTCATTGGTGATGGAGTGCTAACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTACAAGTTACTGAAGCAAAATTGACCAATGGGACACTTCTTTTGATTGCTTGTGCCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATAGTTATCATCTGGCTGTTGTCAATTTTCTCTATTGGCTTGTACAACATAATACATTGGAACCCAAATATTATTCGTGCAATCTCCCCTCATTATGTTCTCAAGTTCTTCAGAGTCACAGGTAAAGATGGGTGGCTTTCTCTCGGAGGGATTCTTCTGGCCATAACTGGTACTGAGGCAATGTTTGCGGATCTTGGTCATTTCACTGCTTTGTCGATAAGGATTGCATTTGCACTTCTTATCTACCCTTGTTTGGTCATACAATACATGGGTCAAGCTGCCTTTCTATCTAAGAACCTTAATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGATCCTGTGTTTTGGCCTATTTTTGTTATTGCCACCCTTGCAGCTATTGTGGGGAGCCAGGCAGTCATTACTGCTACTTTTTCAATTGTTAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGGTCCTCACTCTTTCCATTACAATAGGGTTTCGAGACACGACACTGATTGGAAATGCTTATGGACTCGCCTGCATGACAGTTATGTTCGTGACAACATTTCTTATGGCACTTGTCATAGTATTCGTTTGGCAAAAGAGTATCCTGCTGGCTGCACCTTTTCTCATCTTCTTCTGGTCTGTCGAGGGTGCTTACTTAACAGCAGCAATAATAAAAGTGCCTCAAGGAGGGTGGGTTCCGCTTGTGCTATCAGCCTTTTTCATGATTGTTATGTTTGTCTGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAGGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCTAGCCTTGGTATAGTTCGTGTCCCTGGGATTGGTCTCATATACTCAGAATTGGCGACAGGAGTACCTGCGATATTTTCTCACTTCGTGACAAATCTCCCTGCATTTCACAAGGTTTTAGTCTTTGTTTGTGTAAAGTCTGTTCCTGTTCCATATGTCTCCTCCGAAGAACGTTTCCTCATTGGGAGAGTTTGTCCTAGACCATATCGGATGTATCGGTGCATAGTGAGGTATGGCTACAAGGATATTCAGAAGGATGATGGGGACTTTGAGAACCAACTGATACTAAACATTGCAGAATTTATTCAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCCGAAAGTTCTTCAGTTGATGGGAGGATGGCAGTAATAAGCACTCGGAATATACAATCAAGCTTAATAGTGTCAGGGCATGAAGAAATTGGTACCAGCAACTCCATCTACAGCAGCAAATCCGCCACACTCCAAAGTTTACGATCTGTTTACGAGGAGGAGAATCCACAACTAAGAAGGCGCCAAGTGAGGTTTCAGCTATCTCCCAGCCCTTCAATGGACCCAAGAGTTAAGGAAGAGTTAATAGACTTGATCCAAGCCAAAGAAGCTGGTGTAGCATATATAATGGGACACTCATATGTGAAGGCCAGACGATCTTCGTCGTATTTGAAAAAGCTTGTGATAGATATCGGGTACTCGTTCCTCCGAAAGAACTGCAGAGGCCCGTCTGTTGCACTCAATATCCCTCACATCAGTCTAATTGAAGTGGGCATGATATATTATGTTTAG 1857 42.6 MVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIHWNPNIIRAISPHYVLKFFRVTGKDGWLSLGGILLAITGTEAMFADLGHFTALSIRIAFALLIYPCLVIQYMGQAAFLSKNLNLFPNSFYDSIPDPVFWPIFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLSITIGFRDTTLIGNAYGLACMTVMFVTTFLMALVIVFVWQKSILLAAPFLIFFWSVEGAYLTAAIIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSSEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSESSSVDGRMAVISTRNIQSSLIVSGHEEIGTSNSIYSSKSATLQSLRSVYEEENPQLRRRQVRFQLSPSPSMDPRVKEELIDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23800564 23807807 + MELO3C014763.2.1 Cme06g01960 331109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01960 618 TIGRFAM kup: potassium uptake protein 1 618 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme06g01960 618 PANTHER POTASSIUM TRANSPORTER 4 1 618 - -
Cme06g01960 618 Pfam K+ potassium transporter 1 438 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme06g01960 618 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 618 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01960 Cme-Chr6:23800564 Cme10g00509 Cme-Chr10:3288116 0 dispersed
Cme06g01960 Cme-Chr6:23800564 Cme04g01908 Cme-Chr4:26778147 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01960 K03549 - csv:101208973 1203.35