Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g02003 | ATGGGGGACAGAATCACTGCGCTCCAACAACTGGTTTCACCTTTCGGAAAGACTGATACAGCTTCAGTGCTTTCTGAAGCAATTGAATACATAAAGTTTCTCCATGAACAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGTAGTACAGCAACAACATCAGCAGCAGAGAAATGAGAAATCAATTAAAGAAGGAGAAGGAGGAAAGCAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACATTTCCGGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGTGGAACCTTCAGATAA | 330 | 42.12 | MGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSGAVVQQQHQQQRNEKSIKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR | 109 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 24576276 | 24579219 | - | MELO3C027216.2.1 | Cme06g02003 | 331152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g02003 | 109 | MobiDBLite | consensus disorder prediction | 51 | 74 | - | - | |
Cme06g02003 | 109 | CDD | bHLH_AtbHLH_like | 1 | 42 | IPR045239 | - | |
Cme06g02003 | 109 | PANTHER | TRANSCRIPTION FACTOR BHLH123 | 1 | 99 | - | - | |
Cme06g02003 | 109 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 1 | 34 | IPR011598 | GO:0046983 | |
Cme06g02003 | 109 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 1 | 53 | IPR036638 | GO:0046983 | |
Cme06g02003 | 109 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 1 | 99 | - | - | |
Cme06g02003 | 109 | Gene3D | - | 1 | 73 | IPR036638 | GO:0046983 | |
Cme06g02003 | 109 | MobiDBLite | consensus disorder prediction | 60 | 74 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g02003 | Cme-Chr6:24576276 | Cme10g01341 | Cme-Chr10:15349540 | 1.94E-31 | dispersed | |
Cme06g02003 | Cme-Chr6:24576276 | Cme08g00357 | Cme-Chr8:2256998 | 2.23E-50 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g02003 | - | - | csv:101220471 | 216.468 |