Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02051 ATGCTGGCATCAGAAATAGTCATGCATGGGGAAGCACACAAGACTGGAAGATTGAATTCTAAGGTGAAGACTGCTTTGTTTGCAATTTCCGGTTTAGGTTCGGCTATCCTCTTCTTCATCATAGGCGTATACATTTTCAAAAGGAGATCAACCTTCGAAGATGACCATGAGAAAATAGGAGCTCATGATCTGGAGCTTCCCTTGTTTGATCTATCCTTGATTAACAGTGCCACAGATAACTTCTCACTTAATAATAAGCTTGGAGAAGGTGGCTTCGGGACAGTATATAAGGGTAAGCTTACAAATGGACAAGATGTTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAAGGAACGAGTGAGTTTAAGAATGAAGTAATTCTGATTGCAAAACTGCAACATCGAAACCTTGTAAAGCTTCTTGGTTGCTGCATTGAAGGAGATGAAAAAATGCTAGTTTATGAGTACATGCCTAACAAAAGTTTGGACTTCTTTATATTTGATAAAACACAGCGTCAATTATTAAGCTGGTCAAAACGGTATCGCATTATTTGTGGAGTTGCTAGAGGACTCATGTATCTCCATCAAGACTCGAGATTGAGGATTATACATAGAGACTTAAAAGCCAGTAATGTTTTACTTGACATGGATATGAATCCAAAAATCTCTGATTTTGGGCTGGCTAAAACATGTGGTGGAGATCAAACCGGAGGACGAACATTAAGAGTGATGGGAACTTACGGATATATGGCACCAGAATATGCTTTTGATGGACAATTCTCAGTGAAATCTGATGCTTTTAGTTATGGCATTTTGTTGCTGGAGATCATTAGTGGAAAAAGAAGCAGAACTTTCTGCCATTTGAATGACCAAAACCTAATTGCATATGCATGGCGATTGTGGAAAGAAGGAAATATAGAAGAATTGCTCGACGATGCCATTCGAGAAACATGCAGCCTTTCAGAAGTGTTAAGATGTATCAATATCAGTTTGTTATGTGTTCAACAACATCCTAATGATCGACCCACAATGTCATCAGTGGTTATGATGTTAGGTTGTGAAATTCCTTTGTCACAACCAAAACAACCCGGATTTTTCATAGAAAATGAAGCCATTGAAATGAAAAGATGCTCGAGTAAAGATAAATCAACGTCAACTAATGAATTGACCATTACGCTCCCAGATCCAAGAAATCAAACAATAGTACAACCTCGTTGCTCGCACTACAGGTTCGAAGCATTCAATCTCTTCACTTTAGACACCAACTCTGACGGTCTCCAGCTAACCCTACACCACCTCCGTAAACCGTCACACGGCCAACATCTGATCTCATCGGCCAATTCTGGCCACCATCTTCTGCGACCCCTACAAACTCCAGCCTCCATTCCCACCGGCAAGTTCTTTTATATAAAAGAACTTAGATCGCTTGCTCAGCTTCTTCTTGGCGTAGCAACCCATCTTATCCTTCCTTACTTGGCTGAAACGCCTAATGACCTGAGGAGGAAAAACTGTAAACTCATGTGTGGAAACAACATTACAAATGAACAAGAGGTTCAGGAAGAAGCTTTGAAAAACATTAAACATTTTGGAAAATCATTCACAAATTCTAAGTTTCCCTTTAACTCAGAACGCCTCGTCTTCAAGCTTCAAGTTTCTTCTCGCCTCAGTTCTTCTCTTTCCAGCAGAGATTCACCAAGGATTTTAGCATAA 1710 40.0 MLASEIVMHGEAHKTGRLNSKVKTALFAISGLGSAILFFIIGVYIFKRRSTFEDDHEKIGAHDLELPLFDLSLINSATDNFSLNNKLGEGGFGTVYKGKLTNGQDVAVKRLSQSSGQGTSEFKNEVILIAKLQHRNLVKLLGCCIEGDEKMLVYEYMPNKSLDFFIFDKTQRQLLSWSKRYRIICGVARGLMYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTGGRTLRVMGTYGYMAPEYAFDGQFSVKSDAFSYGILLLEIISGKRSRTFCHLNDQNLIAYAWRLWKEGNIEELLDDAIRETCSLSEVLRCINISLLCVQQHPNDRPTMSSVVMMLGCEIPLSQPKQPGFFIENEAIEMKRCSSKDKSTSTNELTITLPDPRNQTIVQPRCSHYRFEAFNLFTLDTNSDGLQLTLHHLRKPSHGQHLISSANSGHHLLRPLQTPASIPTGKFFYIKELRSLAQLLLGVATHLILPYLAETPNDLRRKNCKLMCGNNITNEQEVQEEALKNIKHFGKSFTNSKFPFNSERLVFKLQVSSRLSSSLSSRDSPRILA 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25854463 25862586 - MELO3C016573.2.1 Cme06g02051 331200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02051 569 Gene3D Phosphorylase Kinase; domain 1 55 156 - -
Cme06g02051 569 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 390 - -
Cme06g02051 569 Pfam Protein tyrosine and serine/threonine kinase 82 350 IPR001245 GO:0004672|GO:0006468
Cme06g02051 569 ProSiteProfiles Protein kinase domain profile. 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02051 569 SMART serkin_6 81 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02051 569 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Cme06g02051 569 SUPERFAMILY Protein kinase-like (PK-like) 66 360 IPR011009 -
Cme06g02051 569 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 40 390 - -
Cme06g02051 569 CDD STKc_IRAK 87 351 - -
Cme06g02051 569 Gene3D Transferase(Phosphotransferase) domain 1 157 358 - -
Cme06g02051 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02051 Cme-Chr6:25854463 Cme04g00755 Cme-Chr4:8964045 2.88E-164 dispersed
Cme06g02050 Cme-Chr6:25849332 Cme06g02051 Cme-Chr6:25854463 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64971 PF07714 PK_Tyr_Ser-Thr 8.10E-51 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02051 - - csv:101210952 752.666