Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02074 ATGGCCACCACCTCCCAAACATCCGATGACGAAGAACTAGAACACGACGAATCAGAAGATGAAGAAGAACACTCCAACGCTGCGTTTTGTCAGAGCTTATACGGAGTTGGTTCTGTTCTCGACCCAACAACCAAATGGGTTCGAGAATGGAATTGGGTCTTCCTCCTCGTCTGTGCAGCGGGGCTGTTCGTCGACCCTTTGTTTCTCTACACGCTTTCCATAAGCGAGTCGTGGATGTGCGTTTTTATTGACGGGTGGTTGGCCATCACCGTCACGGTCCTCCGCTGCATGGGCGATGCTTTGCACCTTTGGAATATCTGGGTTCAGCTGAAGACTGCTACAAAGTCATCCTTTGCAGCTGGTAGGGGCGAGGGTGATGCGAGGGATGAAAATAGAGGGCTTAGAGATAGTAGCCCACGCGCCGTCGCTCTCCGGTATTTGAAGTCCAAGAAAGGCTTCTTTTTTGACCTCTTTGTTATTCTTCCTTTTCCTCAGGTTGTATTATGGGTAGTAATTCCCAGAATAATGAAAGAAGGATTAGTGACAATGGTGATGACAGTATTATTAATAGTATTTTTGTTTCAATATTTACCAAAATTGTATCATTCTGTTTGCTTATTACGACGTCTCCAAAACCTTTCTGGCTACATCTTTGGCACTGTTTGGTGGGGCATTGCTCTCAATCTCATTGCTTACTTTGTTGCTGCCCATGCTGCAGGTGCATGTTGGTATCTATTAGGGGTACAGAGAGCAGCAAAATGTCTTAAAGAGCAATGTAGATCAGCAACAAGCAACAGCTGTGGGCTGAGATTGTTATCATGCAAAGACCCAATCTTCTATGGACCAAACAATATGAGAATGGGAAGAGATAGAGGAAGATTTGATTGGGCAAACAATAGGCAATCGAAGTTCATGTGTTTAGATACTGCTGATAACTTTGATTATGGAGCTTATAAATGGACTGTTCAACTTGTTGTCAATCAAAGTCGATTGGAGAAAATCCTTTTCCCCATCTTTTGGGGCCTCATGACTCTTAGTACCTTTGGGAATTTGGAAAGCACAACTGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTGGTCACCATGTTGATTGGAAATATCAAGGTGTTTCTACATGCAACAACGTCAAAAAAACAAGGAATGCAGCTGAAGATGAGGAACCTAGAGTGGTGGATGAGGAAGCGACGGCTGCCACAAGGGTTTCGTCAGCGTGTTCGGAACTACGAGCGGCAACGGTGGGCGGCGATGCGGGGCGTGGACGAGTGCGAGATGATAAAAAACCTACCGGAGGGGCTTCGACGAGACATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTGCCATTGTTTCAACATATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAAGTCCCTCATCTTCACTAAGGGCGAAACAATAACAAGAGAAGGAGATCCAGTACAAAGAATGCTATTCGTAGTGCGAGGGCATCTCCAAAGCAGCCAAGTCTTACGCGACGGCGTAAAAAGCTGCTGCATGTTGGGCCCCGGCAACTTCAGCGGCGACGAGCTTCTATCCTGGTGCCTCCGCCGCCCTTTCATAGAGCGCCTTCCACCGTCCTCCTTTACTCTCGTGACACTCGAGACCACTGAAGCCTTCAGCTTGGAGGCCGAGGATGTCAAGTATGTAACCCAGCACTTTCGCTACACCTTTGTCAATGACAAGGTCAAGCGCAGTGCCCGCTACTACTCCCCAGGCTGGCGCACTTGGGCTGCTGTTGCCATCCAGCTAGCCTGGCGCCGATATCGCCATCGTCTCACACTCACGTCCTTGTCGTTTATTCGGCCCCGGCGCCCACTCTCACGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTATACGGCGTTGCTTACTTCTCCTAAGCCCAACCACGACCACTTTGATTTTTGA 1986 48.04 MATTSQTSDDEELEHDESEDEEEHSNAAFCQSLYGVGSVLDPTTKWVREWNWVFLLVCAAGLFVDPLFLYTLSISESWMCVFIDGWLAITVTVLRCMGDALHLWNIWVQLKTATKSSFAAGRGEGDARDENRGLRDSSPRAVALRYLKSKKGFFFDLFVILPFPQVVLWVVIPRIMKEGLVTMVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGYIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRSATSNSCGLRLLSCKDPIFYGPNNMRMGRDRGRFDWANNRQSKFMCLDTADNFDYGAYKWTVQLVVNQSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKMRNLEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSFTLVTLETTEAFSLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26030983 26036189 - MELO3C016558.2.1 Cme06g02074 331223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02074 661 MobiDBLite consensus disorder prediction 1 24 - -
Cme06g02074 661 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 657 - -
Cme06g02074 661 CDD CAP_ED 464 570 IPR000595 -
Cme06g02074 661 Pfam Ion transport protein 50 381 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cme06g02074 661 SUPERFAMILY cAMP-binding domain-like 390 578 IPR018490 -
Cme06g02074 661 Gene3D Helix hairpin bin 389 455 - -
Cme06g02074 661 Gene3D Jelly Rolls 462 580 IPR014710 -
Cme06g02074 661 ProSiteProfiles cAMP/cGMP binding motif profile. 464 543 IPR000595 -
Cme06g02074 661 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 657 - -
Cme06g02074 661 Pfam Cyclic nucleotide-binding domain 485 572 IPR000595 -
Cme06g02074 661 SUPERFAMILY Voltage-gated potassium channels 42 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02074 Cme-Chr6:26030983 Cme09g00231 Cme-Chr9:1767519 0 dispersed
Cme06g02074 Cme-Chr6:26030983 Cme04g01904 Cme-Chr4:26747348 1.16E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02074 K05391 - csv:101207531 1276.54