Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02076 ATGGCCTCCACCGCCACCTCCGCCACCCTCCTCCGGGCCACCCCTTTTCTCGGCCAGACCAGAGGCTCTCCTCAAAACCCCCTCAGAGATTTCGTCGCCATGGGAACTGGAAAATACACCATGGGAAATGATTTGTGGTATGGACCCGACAGAGTTAAGTACTTGGGGCCGTTTTCAGCCCAGACTCCATCGTACTTGAACGGTGAGTTCCCTGGTGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCTAAAAACCGAGCTCTTGAGGTAATCCACGGGAGGTGGGCGATGTTGGGTGCATTGGGTTGCATAACACCCGAAGTCTTAGAAAAGTGGCTTAAAGTGGACTTCAAGGAGCCAGTATGGTTCAAGGCAGGAGCCCAAATCTTCACAGAAGGAGGTCTAGACTACCTAGGCAACCCCAACTTGGTCCACGCCCAAAGCATTCTAGCCGTGTTGGGGTTCCAAGTCGTCCTCATGGGTCTAGTAGAAGGGTTCCGCATCAACGGTCTCGATGGCGTCGGCGAGGGCAACGACCTCTACCCAGGCGGTCAATACTTTGACCCACTCGGACTGGCTGATGACCCTGTCACCTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAATGGACGTCTTGCCATGTTTTCTATGTTTGGATTCTTCGTTCAAGCGATTGTGACAGGAAAGGGTCCTCTTGAGAACCTTCTTGACCACCTTGATAACCCAGTGGCTAACAATGCTTGGGTTTATGCCACCAAGTTTGCCCCTGGCTCATAA 795 53.58 MASTATSATLLRATPFLGQTRGSPQNPLRDFVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26050222 26052054 + MELO3C016556.2.1 Cme06g02076 331225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02076 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Cme06g02076 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Cme06g02076 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 264 - -
Cme06g02076 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
Cme06g02076 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00798 Cme-Chr2:10216670 Cme06g02076 Cme-Chr6:26050222 4.63E-39 dispersed
Cme06g02076 Cme-Chr6:26050222 Cme08g00161 Cme-Chr8:1126903 2.06E-118 dispersed
Cme06g02076 Cme-Chr6:26050222 Cme08g00160 Cme-Chr8:1124451 3.76E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02076 K08914 - csv:101207278 525.398