Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02219 ATGGCAACTCACAAGGAGAAAGAGCCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTGTGCTCTTGGAGTCTGGCTACACTACAATTCATACCTCCATCTTCCCCGGCTCCGATTCTTCCCATTTGTTAAATCTCCTGCCCTCTACTAACCCTAATGCTAAGCTTAGGGTTTTCGAAGCGGATGTAATGGACGGTGAGGCGGTGGCCAGAGCTGTGGAAGGCTGCAAGGGAGTGTTTCATATCGCATCCCCCTGTACATTGGAGGATCCGGTTGATCCACAGAAAGAATTGGTGGAGCCGGCGGTTCAAGGCACCGTGAACGTTCTTAATGCGGCGAAGAAGTTTGGAGTGAGGCGTGTTGTTCTTACTTCGTCTATTTCGGCTCTTGTCCCTAATCCTGGTTGGCCGTCCGATATGCCATTTGATGAATCTTCATGGACGGACCTAGAGTACTGCAAATCCCGCAAGAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCAGCATGGGAGTTTGCAGAGAATCATGGACTAGATGTTGTTTCCATCTTGCCAGCCACATGTCTTGGTCCTCTTTTACAACCCACTTTGAATGCAAGTTGTGCTGTATTGCAGCAGTTGCTCCAGGGATCCCAGGATACTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATGTTGCAAAAGCACAAATTTTATTGTTCGAGTCTCCTACTTCTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGAGTTTGCAGACAAAGTTGCGAAAATTTGCCCTCAATTTCCAGTTCACAGATTTGTTGGAGAAACACAACCCGGGTTGGTTGGCTGCAAAGATGCAGCGAAGAAGTTGATTGATCTGGGATTTGTTTTCACTCCTCTTGAAGTTGCCATTGAAGATACGGTTGAGAGTCTTAGAAGCAAAGGCTTTTTGAATCATAGTTGA 987 46.5 MATHKEKEPVCVTGANGFIGSWVVRVLLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNAKLRVFEADVMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVRRVVLTSSISALVPNPGWPSDMPFDESSWTDLEYCKSRKKWYPVSKTLAEKSAWEFAENHGLDVVSILPATCLGPLLQPTLNASCAVLQQLLQGSQDTQEYHWLGAVHVKDVAKAQILLFESPTSSGRYLCTNGIYQFSEFADKVAKICPQFPVHRFVGETQPGLVGCKDAAKKLIDLGFVFTPLEVAIEDTVESLRSKGFLNHS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28634843 28637942 + MELO3C016430.2.1 Cme06g02219 331368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02219 328 CDD FR_SDR_e 10 303 - -
Cme06g02219 328 Gene3D - 2 328 - -
Cme06g02219 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 313 - -
Cme06g02219 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 320 IPR036291 -
Cme06g02219 328 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Cme06g02219 328 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02219 Cme-Chr6:28634843 Cme12g00035 Cme-Chr12:396265 3.11E-114 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02219 - - cmo:103493282 664.84