Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme06g02230 | ATGGCTCCTGCCACTAATTGGCTTTCCTTCTCCCTTTCCCCCATTGAAATGCTTCGCTCTTCTGACTCCCCCTTCCTCCCTTTTGATTCTTCCTCCTCCTCCCCTTCCCCTCACTATCTTCTCGACAATTTCTATCATGGTTGGAGTAACAATAATGCTGCTAATTCTCACTCTAAATCATCTCAACTTTTCTTCAACAATCAAGAAGAAGAAGCTGCTGCTGCTGTCAAAGATGACCAAACCACTATTTTTCTTCATCCACAAACCCAAGCCCATCATCATCATCATCATCATCAACCCAAACTTGAAGATTTCCTTGGCGATTCTTCTCCTATGGTGCGATATTCCGACAGTCAAACCGACACCCAAGATTCCTCTTTAACTCATATTTATGACCATGCTTCCGCTCCTTACTTCCCTCATGACCAACAAGATCTCAAAACCATTGCTGCTTTCCAAGCTTTCTCAGCCAACTCTGGCTCTGAAGTTGATGATTCTGCTTCTATTCCTACAACCCATATCCCTTCTGCTCATTCTATCGACTCTTCTCTTACCAATAATGATTTCCCTTCTTTCTCTACCGGTGCTCTCTCTCTCGCCGTCGCTCAATCCTCCGACACTGCTCCTGCGCCTGTCGTTGCTGTCGATTCTGATTCTTCTAAGAAAATTGCTGACACTTTTGGCCAGAGAACTTCCATTTACAGAGGAGTCACTAGGCACAGATGGACGGGTAGATACGAAGCGCATCTATGGGATAACAGCTGTAGAAGAGAGGGTCAGGCTAGGAAAGGACGTCAAGATGTCCAGGTGGGTATGATAAGGAGGAAAAAGCAGCTAGGGCTTATGATTTGGCAGCTTTGA | 861 | 45.41 | MAPATNWLSFSLSPIEMLRSSDSPFLPFDSSSSSPSPHYLLDNFYHGWSNNNAANSHSKSSQLFFNNQEEEAAAAVKDDQTTIFLHPQTQAHHHHHHHQPKLEDFLGDSSPMVRYSDSQTDTQDSSLTHIYDHASAPYFPHDQQDLKTIAAFQAFSANSGSEVDDSASIPTTHIPSAHSIDSSLTNNDFPSFSTGALSLAVAQSSDTAPAPVVAVDSDSSKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQDVQVGMIRRKKQLGLMIWQL | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 28999704 | 29004068 | - | MELO3C016413.2.1 | Cme06g02230 | 331379 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme06g02230 | 286 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 5 | 203 | - | - | |
| Cme06g02230 | 286 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 | 210 | 267 | - | - | |
| Cme06g02230 | 286 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 | 5 | 203 | - | - | |
| Cme06g02230 | 286 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 210 | 267 | - | - | |
| Cme06g02230 | 286 | Gene3D | AP2/ERF domain | 233 | 280 | IPR036955 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme06g02230 | Cme-Chr6:28999704 | Cme05g01005 | Cme-Chr5:14308733 | 1.96E-26 | dispersed | |
| Cme06g02230 | Cme-Chr6:28999704 | Cme08g00672 | Cme-Chr8:4410391 | 3.25E-22 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme06g02230 | K09285 | - | csv:101217714 | 469.544 |