Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02265 ATGAATTGCTTTCAATGTTGTATGTCAGAGGAGAAAGTCAATAAAAAGTCTTTGAAAAAGAGCATTAAGGAGTTTCATGAGACAAAAACTTTAGCCTCATTTGCCAATATTTCCTTTAAATCTGATGCTAGTCGGCGAAGGTACATAACTGAGGAGATAAAAAAGTTAGGAAAAGGAAACATCTCCGCTCAAATTTTTACATTTGGTGAGCTATCAACTGCTACAAATAATTTCGACCACGAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGGCATCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCAACTTGATCGAAATGGATTTCAAGGAAACAAAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTAAATTTGGTTGGTTATTGTGCTGACGGGGATCAGAGGATTTTGGTTTATGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTTCTTGATATAGCATCAGATAAGCCACCTCTGGACTGGAAGACAAGGATGAAAATTGCTGAAGGAGCGGCAAAAGGACTTGAATACTTACATGAAACCGCTAACCCTCCCGTAATATATCGTGATTTCAAAGCTTCGAACATATTGCTGGATGAGGAATTCAACCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCTACTGGGGACAAATCTCATGTTTCCACTAGGGTGATGGGAACCTATGGTTACTGTGCTCCTGAATACGCGCTGACAGGACAACTGACGACGAAATCAGATGTCTACAGTTTTGGTGTCGTGTTCCTGGAGATCATAACTGGAAGAAGGGTTATAGACAATGCAAGACCAACAGCAGAACAAAATTTAATTACTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTTACCCTAATGGCAGATCCAAAGCTAGAAGGGGATTATCCAGTGAAGGCTCTATATCAAGCTTTGGCAGTGGCAGCCATGTGTTTACAAGAGGAAGCAAATACTCGACCATTGATCAGCGATGTGGTTACAGCTCTTGAATATTTAGCCGCAAACAAGGATGTTGATGCAGATGTAGATGATGAATCAGATTCAGGTTCGGTATCAGGATCAGGATCAGGTTCAGGATCAGGTTCAGCTTCTCCTGATAGAAGTAGTAACAAAGGAGATAAAGATGTTGATGTTGAGGGTGATGGGAGATGA 1221 40.95 MNCFQCCMSEEKVNKKSLKKSIKEFHETKTLASFANISFKSDASRRRYITEEIKKLGKGNISAQIFTFGELSTATNNFDHENLLGEGGFGRVYKGIIESTKQVTAVKQLDRNGFQGNKEFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEYMAKGSLEDHLLDIASDKPPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGDYPVKALYQALAVAAMCLQEEANTRPLISDVVTALEYLAANKDVDADVDDESDSGSVSGSGSGSGSGSASPDRSSNKGDKDVDVEGDGR 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29655336 29658551 + MELO3C025392.2.1 Cme06g02265 331414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02265 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Cme06g02265 406 MobiDBLite consensus disorder prediction 362 406 - -
Cme06g02265 406 MobiDBLite consensus disorder prediction 370 390 - -
Cme06g02265 406 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Cme06g02265 406 CDD STKc_IRAK 84 353 - -
Cme06g02265 406 MobiDBLite consensus disorder prediction 391 406 - -
Cme06g02265 406 Gene3D Transferase(Phosphotransferase) domain 1 155 375 - -
Cme06g02265 406 PANTHER OS07G0668900 PROTEIN 1 371 - -
Cme06g02265 406 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 371 - -
Cme06g02265 406 Pfam Protein kinase domain 80 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02265 406 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Cme06g02265 406 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02265 406 Gene3D Phosphorylase Kinase; domain 1 36 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01054 Cme-Chr1:13069714 Cme06g02265 Cme-Chr6:29655336 1.35E-159 dispersed
Cme06g02265 Cme-Chr6:29655336 Cme11g02350 Cme-Chr11:30503519 9.06E-180 dispersed
Cme08g00269 Cme-Chr8:1741204 Cme06g02265 Cme-Chr6:29655336 2.55E-47 dispersed
Cme12g00367 Cme-Chr12:5086706 Cme06g02265 Cme-Chr6:29655336 2.06E-109 dispersed
Cme06g02265 Cme-Chr6:29655336 Cme06g00702 Cme-Chr6:4544201 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64974 PF00069 Pkinase 4.10E-47 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02265 - - csv:101212756 707.212