Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02272 ATGATCTCTTCTTTAACTCAATCTGCAAAACCCATTAATGGGTCCGACGTGATTCTCCGGCGGAGTTCTCCGGTGCCAATCCGGCGGTTTTCGTATTCACCTTCATTGCCGGCGCAAAAACCCCACAATTCTGTTGTGTGTATGAAAAATGCTCTTCATATCTCATCGGTTTCCAAATTTGGGACATTGGGAACTCAGAAGAGAGATTTCAATACGTGCAAAGCGTACGAGGCTGACCGATCGCAGCCGATTGAGTCGAACATTGAACTGACGGTGGTCGAACAGCCGTCTGAGGCGGCGAAGAAGGTGAAGATCGGACTGTATTTTGCGCTTTGGTGGGGTTTGAACGTTGTGTTCAACATTTACAATAAGAAGGTTTTGAATGCGTATCCATATCCATGGCTAACCTCCACACTTTCTCTTGCTGTTGGTTCTCTGATCATGTTGGTCTCTTGGATGACGAGGATCGCTGAGGCTCCCAAGACTGATTTCGAGTTTTGGAAATCTTTGTTCCCTGTTGCTGTGGCCCACACAATTGGTCATGTAGCTGCAACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACCCATATTATCAAAAGTGGTGAGCCTGCATTTAGCGTATTGGTTTCAAGGTTTCTGTTGGGTGAGACTTTTCCTGTTCCTGTCTACCTCTCTCTTCTCCCGATCATCGGTGGTTGTGCTCTTGCTGCCGTGACTGAGCTCAACTTCAATATGATAGGTTTCATGGGAGCCATGATATCAAACTTGGCATTTGTCTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAATCTGTTAGTGGAATGAACTACTATGCATGTTTGTCTATATTATCCCTCTTGCTTCTTACCCCCTTCGCAATTGCTGTCGAAGGACCACAGATGTGGGCTGCAGGATGGAAAACAGCTCTCTCTGAAATTGGACCTAATTTTGCGTGGTGGGTAACAGCGCAGAGTGTCTTCTATCATCTTTACAACCAAGTATCTTACATGTCGCTGGATGAAATTTCTCCGTTGACATTCAGCATTGGCAACACGATGAAACGTATATCGGTAATAGTTTCTGCAATAATCATCTTCCGCACGCCTATCCAACCCGTCAACGCTCTAGGAGCTGCAATCGCAGTTTTTGGAACCTTTTTATATTCACAGGCAAAACAATAA 1191 45.09 MISSLTQSAKPINGSDVILRRSSPVPIRRFSYSPSLPAQKPHNSVVCMKNALHISSVSKFGTLGTQKRDFNTCKAYEADRSQPIESNIELTVVEQPSEAAKKVKIGLYFALWWGLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLLLTPFAIAVEGPQMWAAGWKTALSEIGPNFAWWVTAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPIQPVNALGAAIAVFGTFLYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29779107 29783386 - MELO3C025401.2.1 Cme06g02272 331421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02272 396 PANTHER SOLUTE CARRIER FAMILY 35 30 396 - -
Cme06g02272 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Cme06g02272 396 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 30 396 - -
Cme06g02272 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Cme06g02272 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme04g00848 Cme06g02272 CCT
Cme04g00848 Cme06g02272 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00848 Cme-Chr4:10777167 Cme06g02272 Cme-Chr6:29779107 0 dispersed
Cme06g00288 Cme-Chr6:1759389 Cme06g02272 Cme-Chr6:29779107 1.72E-99 dispersed
Cme06g02272 Cme-Chr6:29779107 Cme08g00388 Cme-Chr8:2420777 0 dispersed
Cme06g02272 Cme-Chr6:29779107 Cme12g01691 Cme-Chr12:23801716 2.25E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02272 K15283 - csv:101216838 734.947