Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02279 ATGAAACCAAAAACACATACAAAAAATAATAATAATAATAATAATATTCAATACCCATTTCTAATTTTTCTCTCTGATCCTTCCGGCATGCAGTTTCCAATGCCACATTTCTTCTCTGTTTCTCTTCTCATTTCCCTTCTTCTTTTTTCCAATTTTTCTCTCTGTTTTTCACAAGACTACATTATTGGCGGTGGTGGTGGCGGCGGCGGCGGTGATGATGACGACGATGCCAAGCCAGCTGCGCCACCGCCAGAGCAGAATGACTGTAATGGGATATTTTTGTCTTATACATTTATTTCGCGGGAGAAAGAGCTGCCACGGTTGAAGAATGCCACGGCTCAGGCGTGGGCGTTTAAGTCGGAGGCGGTGATTTTGAATGCGGGATCGACGGAGCTGAAGGCATGGAAGATGTTTATTGGATTTCATCACCATGAGATTTTGGTGTCGGCGAATGGTGCGGTAGTGATGGATGGGTCGGATTTCCCTGTGGATGTTGGGAATGGGACTACTTTGGCTGGGTATCCAATGACGGATCTCAAAACGTCGATTGAAACCGCCGGAGATATAAATCAGATTCAGGCTACGGTGGAGCTGACGGGATCGCAATTCGGAATTAAGCCGCCGGGTGTTCCGATGCCGAAGACCATTCGTCTTGTTAACGATGGATTTAAGTGCCCTGCCCCTCGCCATCGCGGTAAGAGATCAATGCATGTATGCTGCAAAAAGGATCCAAAGTTCAAGGTGAAAAAAGAAAAAAAGACCAAATTTTTCGATCGCCAAAACGGAGATCTCTCACTCACTTATGATGTAATGCAAGCTTATGGAAATAATTATCTTGCTCAAGTTACAATAGACAACAACAACCCTCTTGGCCGTCTTGATCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTCAAAGCATGAGAGGAGCTTACACTCATACGAGAGATTTATCTCAATGCGTTTATGGTACTGCTGGCCAATACTATCAAGATTTCGACTTCTCTCAAGTCATGAGTTGCGATAAGCGACCCGTAATCGCTGACCTTCCCGCCGATCGTGCTAATGATGATAAAGTCGGCAAGTTGCCGTATTGTTGTAGGAATGGAAGCTTATTGCCAACATTAATGGATGAGAGTAAAGCAAGGTCTATTTTTCAACTACAAGTCTATAAGCTTCCACCGGATATGAACAGAACGGCGCTTAATCCACCACAGAAATGGAAGATCTCTGGCGTTCTGAATCCGAAGTACGTTTGTGCGGCACCACTCCGAGTCGAACCAACGGAGTTCCCTGACCCGAGTGGACTTCAAGCAACGAGTACCGCAATTGCAAGTTGGCAAATTATATGCAACATTACAAGGCCAAAGGTGAAGCAATCAAAATGCTGTGTTTCATTTTCAGCTTATTATAATGACTCTGTTATTCCTTGCAATACTTGTGCTTGTGGGTGTGACGATATTGATACTGATACTTGCAATCCAAATGCAAATGCAATGCTGCTCCCTCCAGAAGCACTTTTGGTTCCATTTGCTAACAGGACAGCGAAAGCTAGAGCCTGGGCTAAAATTAAGCATTACCGAAATCCCAAAAAACTGCCATGTCCTGATAATTGTGGGGTTAGCCTAAATTGGCATATCAACTCTGATTATACTAATGGATGGACTGCAAGATTAACACTCTTCAATTGGGAAGATTATCCATTTGAAGATTGGTTTACTGCCATTCAGTTAAACAAGGCCGGTCGCGGTTACGAAAACGTTTATTCCTTCAATGGAACCAAGCTTCCCAACATCAAAAATACAATCTTCCTCCAAGGTTTGCCTGGTTTATCTTACTTGATGGGAGAGGTTAATGGGACCAATCCTAAAACTGATCCAAGAGTTCCTGGGAAGCAACAATCTGTTATTTCTTTCACCAAGAAGGGTCTACGCAACATCGACATACTACGGGGCGATGGTTTCCCAAGCAAAGTCTTTTTCAATGGCGAAGAATGTGCGCTTCCAAAGGTTATTCCCACCGCAAGTTCAGCCCACCACCGTTCTTGGGACGGTTTCATGTCACTTCTCTTCATCTTAGCTCTTACATTCGTGTTTATAACCGATCGCGTCCATTGA 2127 43.82 MKPKTHTKNNNNNNNIQYPFLIFLSDPSGMQFPMPHFFSVSLLISLLLFSNFSLCFSQDYIIGGGGGGGGGDDDDDAKPAAPPPEQNDCNGIFLSYTFISREKELPRLKNATAQAWAFKSEAVILNAGSTELKAWKMFIGFHHHEILVSANGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGSQFGIKPPGVPMPKTIRLVNDGFKCPAPRHRGKRSMHVCCKKDPKFKVKKEKKTKFFDRQNGDLSLTYDVMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLSQCVYGTAGQYYQDFDFSQVMSCDKRPVIADLPADRANDDKVGKLPYCCRNGSLLPTLMDESKARSIFQLQVYKLPPDMNRTALNPPQKWKISGVLNPKYVCAAPLRVEPTEFPDPSGLQATSTAIASWQIICNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCDDIDTDTCNPNANAMLLPPEALLVPFANRTAKARAWAKIKHYRNPKKLPCPDNCGVSLNWHINSDYTNGWTARLTLFNWEDYPFEDWFTAIQLNKAGRGYENVYSFNGTKLPNIKNTIFLQGLPGLSYLMGEVNGTNPKTDPRVPGKQQSVISFTKKGLRNIDILRGDGFPSKVFFNGEECALPKVIPTASSAHHRSWDGFMSLLFILALTFVFITDRVH 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29983882 29987009 - MELO3C025407.2.1 Cme06g02279 331428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02279 708 MobiDBLite consensus disorder prediction 67 88 - -
Cme06g02279 708 PANTHER COBRA-LIKE PROTEIN 7 40 707 - -
Cme06g02279 708 Pfam COBRA-like protein 278 457 IPR006918 GO:0010215|GO:0031225
Cme06g02279 708 PANTHER COBRA-LIKE PROTEIN 10 40 707 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00837 Cme-Chr4:10529127 Cme06g02279 Cme-Chr6:29983882 0 dispersed
Cme06g00765 Cme-Chr6:5050674 Cme06g02279 Cme-Chr6:29983882 0 dispersed
Cme06g02279 Cme-Chr6:29983882 Cme12g01924 Cme-Chr12:25270241 8.61E-28 dispersed
Cme06g02279 Cme-Chr6:29983882 Cme02g01812 Cme-Chr2:24896065 3.11E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02279 - - csv:101216608 1302.35