Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02315 ATGGATTTTTCAGACAAACCCTTCCCCACAAAACGTGAATGTAGCATTCAAATCAACGCGCTATCTCCCCAACCTCCTGCCTTTAAAGTTCCTTTCCCTCACCTTCCAACTGGACTCTTCATTTATTTCACCGATTTTGTTTTAATTTTGCTTCATCATCCCATACATACTGGCCAGGGCAAAGGCAGCTCAATAATTCCTATCTTAATGGCCAAATTAACTACACAAATCCTTCAGTTTTGCTGCATCTTTATCCTTTTGTTTCCGATGCTGCTTCCGGCCAGCTCTCCAGCGGATCTTGTGCAGACAGAGTGCTTGAGCGTACCCTCGTCCCAGTTCTCCAACTCACTCCTCTCCACCATCGATGTTGTACGACAGGTTATGGCCATTTTCTCTCCATTCAGTAAATTACTGGGAGACTTCCGGCTTTCCACCGCCATTTCCGACTGTCTCGATCTGCTCGACTCTTCTGCTGACCAGTTGAGCTGGTCCCTCTCCGCCACCCAAAATCCCAAGGTTCACGGGGATATTGTCGGTTTTGCTGCCGCTGGACCTACTACTAAAGACCACAGCACAGGAGATCTGAGTTCTGATCTGAAGACATGGCTGAGCGCTGCAGTGGTTAATCCGGAAACATGCATGGATGGGTTTGAGGGCACCAATAGCATTATCAAAGGTCTAGTATCTGGAGGCATCAACCAGTTAACTTCACAGCTCTATGACCTTCTTTCCATGGTGAAATCAATCCCCAATCAACCGAGCGAGTTTCCTTCATGGCTGAAATCTGAGGACCGGAACTTGCTGCAACTAAATGACTTGGCCGCCGATGCCACAGTGGCCGCCGATGGGACTGGGGATTTCACCAATGTGATGGATGCGGTGCTAGCAGCCCCTGACAAAAGCACACGACGTTATGTCATATACATAAAGAAGGGTGTATACTTGGAGAACGTGGAGATCAAGAAGAAGAAGTGGAATCTCATGATGATTGGGGATGGAATAGATGCCACGATCATATCGGGTAATCGGAGTTTTATTGACGGTTGGACAACATTCCGGTCAGCGACCTTCGCTGTAAGTGGAAGAGGATTCATAGCGCGAGACATAACATTCGAGAATACTGCAGGAGCAGAGAAACATCAAGCAGTGGCACTTAGATCGGACTCCGATCTGTCAGTATTTTTTAGATGCCGAATTAGAGGCTACCAAGACACGCTGTATACGCACACCATGCGCCAATTTTACCGCGAGTGCCAAATCAGTGGGACCGTTGATTTTCTTTTCGGCGATGCCACCGTCGTTTTTCAAAACTGCAGCATCCTGGCGAAGAAGGGTCTTCCCAACCAGAAAAACACCATCACTGCTCAGGGCCGGAAAGACCCGAACCAACCCACCGGCTTCTCCATTCAATTCTGCAACATATCTGCGGATTCAGACCTTAAACCCTCGGTTAACACTACTGCTACGTACCTTGGAAGACCATGGAAGGAATATTCCAGAACCATTATCATGCAGTCATACATCAGCGACGCCATTAGGCCAGAAGGTTGGCTTGAGTGGAACGGCAATTTTGCATTGAATACACTATTCTACGCTGAGTTTATGAATTACGGGCCGGGGGCGGGATTGGCCAAGCGTGTCAATTGGCCCGGTTACCACCGACTGAATCAAACCAGTGAAGCCACTAACTTCACCGTGGCTCAATTCATTGAAGGAAACATGTGGCTACCGTCCACGGGTGTCAAATACACTGCAGGACTGGGAGCTAATTAG 1773 48.22 MDFSDKPFPTKRECSIQINALSPQPPAFKVPFPHLPTGLFIYFTDFVLILLHHPIHTGQGKGSSIIPILMAKLTTQILQFCCIFILLFPMLLPASSPADLVQTECLSVPSSQFSNSLLSTIDVVRQVMAIFSPFSKLLGDFRLSTAISDCLDLLDSSADQLSWSLSATQNPKVHGDIVGFAAAGPTTKDHSTGDLSSDLKTWLSAAVVNPETCMDGFEGTNSIIKGLVSGGINQLTSQLYDLLSMVKSIPNQPSEFPSWLKSEDRNLLQLNDLAADATVAADGTGDFTNVMDAVLAAPDKSTRRYVIYIKKGVYLENVEIKKKKWNLMMIGDGIDATIISGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTAGAEKHQAVALRSDSDLSVFFRCRIRGYQDTLYTHTMRQFYRECQISGTVDFLFGDATVVFQNCSILAKKGLPNQKNTITAQGRKDPNQPTGFSIQFCNISADSDLKPSVNTTATYLGRPWKEYSRTIIMQSYISDAIRPEGWLEWNGNFALNTLFYAEFMNYGPGAGLAKRVNWPGYHRLNQTSEATNFTVAQFIEGNMWLPSTGVKYTAGLGAN 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30555564 30558417 + MELO3C013699.2.1 Cme06g02315 331464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02315 590 Gene3D - 270 587 IPR012334 -
Cme06g02315 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 117 249 IPR035513 -
Cme06g02315 590 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 106 248 - -
Cme06g02315 590 PANTHER PECTINESTERASE 106 248 - -
Cme06g02315 590 Pfam Pectinesterase 276 573 IPR000070 GO:0030599|GO:0042545
Cme06g02315 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 93 252 IPR035513 -
Cme06g02315 590 SUPERFAMILY Pectin lyase-like 274 586 IPR011050 -
Cme06g02315 590 SMART PMEI_2 96 249 IPR006501 GO:0004857
Cme06g02315 590 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 253 587 - -
Cme06g02315 590 PANTHER PECTINESTERASE 253 587 - -
Cme06g02315 590 CDD PMEI-like_4 83 250 - -
Cme06g02315 590 Pfam Plant invertase/pectin methylesterase inhibitor 142 242 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00062 Cme-Chr2:552855 Cme06g02315 Cme-Chr6:30555564 3.91E-168 dispersed
Cme06g02315 Cme-Chr6:30555564 Cme06g00898 Cme-Chr6:6304129 9.57E-144 dispersed
Cme06g02315 Cme-Chr6:30555564 Cme09g01983 Cme-Chr9:23683621 1.77E-143 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02315 K01051 - csv:101207185 1001.12