Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02324 ATGTCTGTTTTTTGTCTTTGCTTCTGCCTTTTATTTACTGGCGTCGCCGCGTCCGGTGGAGACGGCAGCCCCCAGTCCAGGGATCTCGATAACACACCCACCTGGGCTGTTGCTGCTGTTTGCTTCTTTTTCGTCCTTATTTCCATTGTCTTGGAAAATGTTCTTCACAAACTTGGAACGTGGTTGACAGAAAAGCGCAAGAGTTCTCTGTATGAAGCTCTGGAGAAGGTTAAGGCTGAGTTGATGATTTTGGGTTTCATCTCCCTGCTTCTGACTTTTGCTCAAGCATATATAGTCCAAATCTGTATTCCTCCGTCCATTGCAAACTCCATGTTGCCCTGTCCCCTTAAAGAGAAAGATGCCTCATCATCTACAACCGATGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCTGGAGGTCACAATGTCGTCTCGTGTAAGGATGGTAAGGTGTCTCTTATATCTATTGATGGATTGCATCAGTTGCACATTCTCATTTTCTTCTTGGCCGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGGTAAAGATTCGAGGCTGGAAGGAGTGGGAGCAGGAAACTTTAACGCATAACTATGAGTTTTTCAATGGTCTGTCATTTTACGCTTGTCGAACTGTGATTCTTTTATCTCATGGGTTCAAATCACAGTTTATTCGCCAATTCCTTAGCATAAACTTTGTAGTTTCACATAGTTGCTTCTTCAGGCAATTTTATGGGTCTGTTAGTAGGGCTGATTACTTGACGCTACGCAACGGATTCATAACAGTCCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGATGACTTTAAGATAATCTTAGCGGTTGGATCAAAACTTCAAGCCATTTTGACTAGGATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCACTCGTGCAAGGATCCGACAACTACGTTACGCTTCCAATATACGCCCTTGTAAATCAGATGGGTTCAGGTATGAAGAGGTCCATCTTTGATGAACAGACATCAAAGGCACTCAAGAAATGGCACGAAACGGCCAAGAAGAAGCGGGCTAAACGAGCCTCAGCAACTAAAACCCTCGGAGGTAGTTCAAATGCTTCACCTCTACGCTCATTGCGACGGTTTAAAACTACAGGACACTCCATACGTGTGCCTACGTATGAGGACCTTGAGTCATCTGATTACGAGGGCGATCCATCAGCAACACCTACACAAGTGTCAACAAGTGAATCGATTAATGTTGATGTAGAAGATGGAGATGAAATACAAGAAATCGCTGAAACAGAGCAATCCCACAGTACAATGCAAAGTAAAGAAGGAGATGAGTTCTCATTTATAAAGCCTGCACCACTAGGATAA 1434 43.17 MSVFCLCFCLLFTGVAASGGDGSPQSRDLDNTPTWAVAAVCFFFVLISIVLENVLHKLGTWLTEKRKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPSIANSMLPCPLKEKDASSSTTDEDEHHRRLQWLIRRSLAGGHNVVSCKDGKVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRVKIRGWKEWEQETLTHNYEFFNGLSFYACRTVILLSHGFKSQFIRQFLSINFVVSHSCFFRQFYGSVSRADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDNYVTLPIYALVNQMGSGMKRSIFDEQTSKALKKWHETAKKKRAKRASATKTLGGSSNASPLRSLRRFKTTGHSIRVPTYEDLESSDYEGDPSATPTQVSTSESINVDVEDGDEIQEIAETEQSHSTMQSKEGDEFSFIKPAPLG 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30646897 30651484 - MELO3C013709.2.1 Cme06g02324 331473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02324 477 PANTHER MLO-LIKE PROTEIN 334 454 - -
Cme06g02324 477 MobiDBLite consensus disorder prediction 422 438 - -
Cme06g02324 477 PANTHER MLO-LIKE PROTEIN 1 297 335 IPR004326 GO:0006952|GO:0016021
Cme06g02324 477 PANTHER MLO-LIKE PROTEIN 1 15 298 IPR004326 GO:0006952|GO:0016021
Cme06g02324 477 MobiDBLite consensus disorder prediction 370 477 - -
Cme06g02324 477 MobiDBLite consensus disorder prediction 382 399 - -
Cme06g02324 477 PANTHER MLO-LIKE PROTEIN 1 334 454 IPR004326 GO:0006952|GO:0016021
Cme06g02324 477 Pfam Mlo family 27 298 IPR004326 GO:0006952|GO:0016021
Cme06g02324 477 Pfam Mlo family 297 335 IPR004326 GO:0006952|GO:0016021
Cme06g02324 477 Pfam Mlo family 335 395 IPR004326 GO:0006952|GO:0016021
Cme06g02324 477 PANTHER MLO-LIKE PROTEIN 297 335 - -
Cme06g02324 477 PANTHER MLO-LIKE PROTEIN 15 298 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02324 Cme-Chr6:30646897 Cme10g00061 Cme-Chr10:463879 5.66E-90 dispersed
Cme07g00183 Cme-Chr7:1254949 Cme06g02324 Cme-Chr6:30646897 3.90E-24 dispersed
Cme12g01740 Cme-Chr12:24133649 Cme06g02324 Cme-Chr6:30646897 2.66E-08 dispersed
Cme06g02324 Cme-Chr6:30646897 Cme08g01000 Cme-Chr8:6523121 5.52E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02324 K08472 - csv:116402632 535.413