Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02359 ATGTTATCAAGCTTGATGAACTTCCTGAGGGCTTGCTGGCAGCCATGTGCCGATGGTCTCTTGCGTCGTCGGGGCAGTGGTTCCGACTCGGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCACCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGTCAGCTTGAGTCTGGTCCCTTGAGCTTGCTCGAGTCTGGACCCTATGGAACCTTTGTAGGAATATACGATGGCCATGGTGGCCCCGAGACATCGCGATTCATATGTGATAACTTGTTCCAGCATCTAAAAGTGTTTGCCACAGAAGAAAAGGAAATGTCAGTAAATGTGATAAAAAAAGCATTCCAAGCAACAGAAGAGGGTTTTCTCTCTCTTGTCACCAAGCAATGGCCTATGAACCCTCAGATTGCAGCCGTTGGTTCTTGCTGTCTGGTTGCTGTCATTTGTAATAGTAAACTCTACATTGCCAACCTTGGTGATTCCCGAGCTGTGTTAGGAAGGCTTGTTCGGTCCACGGGAGAAGTTCTTCCCATTCAGCTGTCATCAGAGCACAATGTAAGTATACAATCAGTCCGCCAGGAGATGCAGTCTTTGCACCCAGATGACTCCCAGATAGTAGTGCTGAAGCATAATGTATGGCGCGTAAAGGGCCTGATTCAGATTTCTCGGTCAATTGGAGATGTATATCTCAAAAAGCCAGAATTTAACCGGGAGCCTTTGTATGCTAAGTTTCGCCTCCGAGAACCCTTCAGTAGGCCTATTCTGAGCTCAGAACCAGCAGTTTCTGTGCACGAACTCGATTCAAATGATCAATTTCTTATATTTGCCTCTGATGGGCTGTGGGAGCATCTTAGCAACCAGGATGCAGTTGATATAGTTCACAAGCATCCTCACAGTGGAAGTGCAAGAAGGCTGGTGAAAGCAGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGGTACTCAGATTTGAAGAAGATTGACCGTGGAGTTCGTCGTCATTTTCACGATGATACAACAGTGATCGTCGTGTTTCTCGGTTCAAGCAGAGGGAGTAATGGTACAGGGGGAGGGAGCCCTGTTTTGTCTGTGAGAGGGGGAGGGGTTAACCTATGTGCAAAATCTCTAGCACCTTGA 1173 47.14 MLSSLMNFLRACWQPCADGLLRRRGSGSDSVGCQDGLLWYKDHGHHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFVGIYDGHGGPETSRFICDNLFQHLKVFATEEKEMSVNVIKKAFQATEEGFLSLVTKQWPMNPQIAAVGSCCLVAVICNSKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIQSVRQEMQSLHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYAKFRLREPFSRPILSSEPAVSVHELDSNDQFLIFASDGLWEHLSNQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSRGSNGTGGGSPVLSVRGGGVNLCAKSLAP 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30882718 30887062 - MELO3C013745.2.1 Cme06g02359 331508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02359 390 ProSiteProfiles PPM-type phosphatase domain profile. 50 358 IPR001932 -
Cme06g02359 390 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 6 386 - -
Cme06g02359 390 SMART PP2C_4 42 356 IPR001932 -
Cme06g02359 390 Gene3D - 40 364 IPR036457 -
Cme06g02359 390 CDD PP2Cc 82 358 IPR001932 -
Cme06g02359 390 SUPERFAMILY PP2C-like 62 359 IPR036457 -
Cme06g02359 390 Pfam Protein phosphatase 2C 83 327 IPR001932 -
Cme06g02359 390 PANTHER ALPHABET, ISOFORM E-RELATED 6 386 - -
Cme06g02359 390 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01240 Cme-Chr1:15763954 Cme06g02359 Cme-Chr6:30882718 0 dispersed
Cme06g02359 Cme-Chr6:30882718 Cme11g00367 Cme-Chr11:3727600 0 dispersed
Cme06g02359 Cme-Chr6:30882718 Cme08g00965 Cme-Chr8:6344338 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02359 K01102 - csv:101220137 748.429