Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g02394 | ATGGGCATGATGGGTGGACGACAAAGGACTTACACCGCTAATTCCACTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCTACTGTTTTTAGAGCGATCTATATTCCCTCAAATGAAGTCGTCGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGGAGGGAGGCTCAAACGATGAGTTTGATAGATCATCCAAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCATACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATTCTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGTCAAGGACACATACATCGGGATGTGAAGGCTGGAAACATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGCGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACTCCATGCTGGATGGCACCAGAGGTATTGCAACCAGGAACAGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATTACAGCTTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAACGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGTCTGGTGAAAGATCAAACCAAGAGACCAACAGCTGAGAAACTTCTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGGTTTCTTTGAAGAAACTATTCGCTAATTTGCCTCCTCTTTCACATCGTGTAAAGGACCTGCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCGGAGCAAGAAGCATTGTCACAGAGTGAGTACCAGCGAGGAGTAAGTGCGTGGAACTTTGATGTTGAAGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAATATAAATTCTTGTAGTGTTAAGGATGCCTTCTATCCTCGATCTATTTTGAAGAATTTCAATTCGTGTAATGAATCATCTCAGGATGAACATGGAGTAGGAGCAAGTGGTCAGGGATTGTCACAAGTAGAGTGCTTGAACAAAAGGGGAAACTTTGTGGAAAGTGATGCTCTGAAAGCGGGGTTGCAAGAAAAAACTGGAAAGAGAAATGGAACTAGCACCGAAGCAGAAGCCTCTACCTCTGGCCAAGACATTGTACAAGGCAAGACCAAAACCCAAGTGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTTTACCTGGCATTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCAGCTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGCGCCTCAGCAAACAGCCTATCAGCACCCATAAAACCTTCTGGAGGGTTTAGAGATTCAATTGACGACAAATCCAAAGCTAATCTTGTACAAATTAAGGGACGTTTTTCAGTGACATCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACAGTTTCACGTCGGTCTTCACAGAACTCTCCTCTACGAAAGTCAGCTAGTGTTGGTGATTGGATTTTCGATTCCAAGCAGTCTGTCAGCCAACCCCCTAAGGAGGCTTCCAACACAAACGTTCCCACATCAATTCTTCTGCCTCATCTTCAGAATCTTTTCCATCAGACATCGATTCAACAGGATCTTATAGTGAACTTGTTGAATAGCTTACAAACAGCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTACCTCCATTGCCCCGAAGCTCAGAGAATAATGGAAGTGCTGAAACAGCGGCAGTTGAGAGAGAGCGTTTACTTCTGCGGAAAGTCTCTGAACTTCAAGCTAGAATGACGCATTTGACTTACGAATTGACCGCCGAAAAGTTGAAATACATTCAATTACAAGAGCAGTTTAACTCGGCATCTGGTCAGGAAGAAAATGAGATCAAAAGGGAAGAAAATGTCTAA | 2190 | 43.01 | MGMMGGRQRTYTANSTDYKLLEEIGYGASATVFRAIYIPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPEVSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMAEMKEEEENINSCSVKDAFYPRSILKNFNSCNESSQDEHGVGASGQGLSQVECLNKRGNFVESDALKAGLQEKTGKRNGTSTEAEASTSGQDIVQGKTKTQVPKGRQTQSGPLLPGIVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSIDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQPPKEASNTNVPTSILLPHLQNLFHQTSIQQDLIVNLLNSLQTADVVDATQNGKLPPLPRSSENNGSAETAAVERERLLLRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSASGQEENEIKREENV | 729 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 31100278 | 31109821 | + | MELO3C013777.2.1 | Cme06g02394 | 331543 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g02394 | 729 | MobiDBLite | consensus disorder prediction | 485 | 538 | - | - | |
Cme06g02394 | 729 | CDD | STKc_OSR1_SPAK | 17 | 279 | - | - | |
Cme06g02394 | 729 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 95 | - | - | |
Cme06g02394 | 729 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 330 | - | - | |
Cme06g02394 | 729 | MobiDBLite | consensus disorder prediction | 485 | 506 | - | - | |
Cme06g02394 | 729 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524 | |
Cme06g02394 | 729 | Pfam | Protein kinase domain | 18 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme06g02394 | 729 | ProSiteProfiles | Protein kinase domain profile. | 18 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme06g02394 | 729 | SMART | serkin_6 | 18 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme06g02394 | 729 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 335 | IPR011009 | - | |
Cme06g02394 | 729 | MobiDBLite | consensus disorder prediction | 431 | 465 | - | - | |
Cme06g02394 | 729 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 3 | 721 | - | - | |
Cme06g02394 | 729 | Coils | Coil | 343 | 363 | - | - | |
Cme06g02394 | 729 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 3 | 721 | - | - | |
Cme06g02394 | 729 | MobiDBLite | consensus disorder prediction | 426 | 472 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g02394 | Cme-Chr6:31100278 | Cme09g00387 | Cme-Chr9:3475453 | 0 | dispersed | |
Cme06g02394 | Cme-Chr6:31100278 | Cme06g00521 | Cme-Chr6:3294460 | 4.37E-108 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64978 | PF00069 | Pkinase | 5.80E-61 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g02394 | - | - | csv:101213683 | 1412.9 |