Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g02416 | ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGAGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATTAAGGACATGGCGTTGAAATTTTCTGGTGCTTATAGGCAGTGCAAGCCTTGCACAGGCTCCAGTAGCTATAAGAAAGGGCAGAGACCATACCCAGATTTTGACACAGCTTCAGAAGGGGTTCCATATCCTTACATAGGAGGGGCAAGTGCAAGTTCAACCCCTGCTTGGGACTTCCCTCCTATTAACCGCCACCCTCATACAAGATCTGACTCTAGATTTAAAGCGGCTTATAGAGGAGATCAGACCCCTGGAGGCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCCGGCGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGGGAGAATTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAATCAACAAGCTCTTCATACGCCACCAAGAACTGAGGACGGGAGGGATTCTTCTTACTCAAAAATGGGAAGGGATAGTCCGATGACTTCCGCGAACAAAGACTGGACGCCGAGAAACTATAAACCTTCAGGAAGTAAAGGATTTCCATCTGACCAGCATTATGATCATGGAAACAGCCACCCATATGCAGGTTCAAGCGCCTACCCAGCAGGCAGCGCCAAAGGTGACATGTCCTCGATGGAAGCATCACGCACAACAACCTCTTCTCGAGACGAACCTTCAATCTCCATTAGCAATGCAAGCGACATTGAGGCGGAATGGGTCGAGGAAGATGAACCGGGGGTCTACATAACTATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTCAGATTCAGCCGCGAAAGGTTTGGGGAAATGAACGCGAAGCAATGGTGGGAACATAACAGGGAGAGGATCCAAGCTCAATACCTATAA | 1086 | 48.8 | MFTCIACTKQTDDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPINRHPHTRSDSRFKAAYRGDQTPGGDSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSANKDWTPRNYKPSGSKGFPSDQHYDHGNSHPYAGSSAYPAGSAKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEHNRERIQAQYL | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 31284780 | 31292020 | - | MELO3C013800.2.1 | Cme06g02416 | 331565 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g02416 | 361 | MobiDBLite | consensus disorder prediction | 279 | 296 | - | - | |
Cme06g02416 | 361 | Pfam | Transcription factor BRX N-terminal domain | 23 | 56 | IPR027988 | - | |
Cme06g02416 | 361 | PANTHER | BREVIS RADIX-LIKE PROTEIN-RELATED | 1 | 361 | - | - | |
Cme06g02416 | 361 | MobiDBLite | consensus disorder prediction | 11 | 30 | - | - | |
Cme06g02416 | 361 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 305 | 360 | IPR013591 | - | |
Cme06g02416 | 361 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 142 | 196 | IPR013591 | - | |
Cme06g02416 | 361 | ProSiteProfiles | BRX domain profile. | 142 | 197 | IPR013591 | - | |
Cme06g02416 | 361 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 1 | 361 | IPR044532 | - | |
Cme06g02416 | 361 | ProSiteProfiles | BRX domain profile. | 306 | 361 | IPR013591 | - | |
Cme06g02416 | 361 | MobiDBLite | consensus disorder prediction | 223 | 247 | - | - | |
Cme06g02416 | 361 | MobiDBLite | consensus disorder prediction | 203 | 296 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g02061 | Cme-Chr5:28890581 | Cme06g02416 | Cme-Chr6:31284780 | 2.92E-103 | dispersed | |
Cme06g02416 | Cme-Chr6:31284780 | Cme03g00380 | Cme-Chr3:5277130 | 2.86E-14 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g02416 | - | - | csv:101210860 | 737.643 |