Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02456 ATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCCCCAACTTTTGGCCTTGGCCGAGAGAGGAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGTGTCTTGTCTGAGCTTGATGATGATAGCTGTAACAGCACTGGCTCGGATGCCCCTTCGTCGGTGGCACAAGACCGGATGATCATTGTTGGAAATCAGCTCCCTATTCGGGCGAATCGGAACGAGAATGGAGACTGGGAGTTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGGCTCGGAGAAGATGTGGAAGTGATTTATATTGGTTGTCTTAGAGAGGAGGTTGATCCAAGGGAGCAAGATGATGTTGCACAAACTCTTTTGGACCGATTCAAGTGCGTCCCGACGTTCCTTCCTCCGGAGCTTTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTATGGCCACTGTTTCACTATATGCTTCCTCTGTCCCCGGATCTTGGTGGCCGATTTGATCGGTCCCTTTGGCAAGCGTATCTTTCGGTGAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGTCCTGATGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGTGAAACTTGGATTCTTCCTACACAGTCCATTTCCTTCGTCTGAGATTTATCGAACACTTCCCGTTAGAGATGAACTTCTTCGGGCACTATTGAACTCTGATCTTATTGGCTTCCACACGTTTGATTATGCTAGGCATTTTTTATCTTGCTGCAGCAGAATGCTTGGTCTGTCTTACCAATCTAAGCGAGGTTACATCGGGCTTGAATACTATGGTCGTACTGTGAGCATTAAGATTCTTCCTGTCGGTATTCATATAGGCCAGCTCCAAAATGTTTTGAATCTCCCTGAGACTGTATCTAAAGTCGCAGAACTGCAAGATCGGTTCAAGGGTCAAACTGTTTTGCTTGGGGTTGATGATATGGACATTTTTAAGGGGATCAGCTTGAAACTTTTGGCATTTGAACAATTGCTCCGACAACATCCTGAGAGATGGGGTAAAGCTGTGTTAGTACAGATTGCAAACCCTGCAAGAGGCAGAGGCAAAGACGTACAGGAGGTTGTGGCTGAAACTACCGCGACAGTGGATAGAATCAATACAACATTCAGAAGGCCAGGATATGAGCCTGTCGTCTTGATAAATACTCCCTTGCAGTTTTACGAGCGAATCGCTTACTATGCAATTGCTGAGTGCTGCCTTGTTACTGCAGTGAGAGATGGGATGAATCTTATACCTTACGAATATATTATATGTCGACAAGGCAATGAGAAGCTTGACGATGTTCTTGGGCTAAATCCATCAGCTGCAAAGAAGAGCATGTTAGTCTTGTCTGAGTTTATTGGGTGTTCCCCTTCCCTCAGTGGAGCTATTCGGGTTAACCCATGGAATATTGAAGCAGTCACCGAAGCAATGGATTCTGCGCTGGTAATCCCCGAGGCAGAAAAGCAATTGCGACATGAAAAGCATTATAGGTATGTTAGCACACATGATGTTGCATATTGGGCTCGCAGCTTTCTGCAGGATCTGGGCAGGGCGTGTAGAGACCATTCAATGAGGAGGTGCTGGGGCATAGGTTTTGGTTTAGGATTTCGGGTTATTGCCCTGGACCCAGATTTTAGGAAGCTTTCAGTTGATCATATTGTTTCAGTGTATAAGAGAACAGGCTACCGAGCAATTTTGTTAGATTATGATGGTATCATGACGCTTCCTGGATCAATTAGCATGAATCCAACTTCAGAAGCCCTTGGAATCTTGAACAACTTGTGCAAAGATCCTAAAAATGTTGTGTTCCTTGTTAGTGGGAAGGACCGAAAAACTTTGACTGAATGGTTTTCACCATGCGAAAAGCTTGGACTAGCTGCAGAACATGGTTTTTATCTTAGGCCAAATCAAACTGCAGATTGGGAGACGTGTGTGGCTGTGACCGATTTTGACTGGAAACAGATTGCAGAACCCGTTATGCAATTGTATACTGAGACAACTGATGGCTCTACAATTGAAACTAAAGAGAGTGCGCTTGTTTGGAACTACCTTTATGCGGATCCTGATTTCGGGTCGTGCCAGGCCAAGGAACTTTTAGATCACCTTGAAAGTGTTCTAGCCAATGAACCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGAGACGTCACGGTTATGTTCGAGGAATTCCTCGTCAATCTGCCTTCGTTATAGTGAAGGAGTTCCTCGCCAATCTGCCATTTGGGGAGAAAGGTCATTTTCTTTGGCTTGCTGAGGGGCTTGATGGTTCTTTTCTGGTTTTTGTAATGCAATGGCAGGGTGTAAACAAGGGCATTGTAGCAGAATATCTCTTGCAAACAATGAAGGAGAAGGGAATGCTTCCCGATTTTGTTCTATGCATTGGAGACGACAGGTCAGACGAGGACATGTTCGAGGTGATAATGAATGCAAAAGCCAGCCTTTCTCCAGGTGCCGAAGTGTTCGGTTGCACCGTTGGCCAGAAACCGAGCAAGGCCAGGTATTACTTGGAAGACACACACGAAATCTTGAGAATGTTACAGGGTCTTACCCACGCGTCTGAACACGCCACTAGAGCTGCTCCACAGACAACGGCTCGTAGAGTGGTAATCGCAGAGAGTAAATAA 2751 44.82 MVSRSYSNLLELASGGCSPTFGLGRERKRLPRVATVAGVLSELDDDSCNSTGSDAPSSVAQDRMIIVGNQLPIRANRNENGDWEFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQDRFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVVAETTATVDRINTTFRRPGYEPVVLINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDDVLGLNPSAAKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPDFRKLSVDHIVSVYKRTGYRAILLDYDGIMTLPGSISMNPTSEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNQTADWETCVAVTDFDWKQIAEPVMQLYTETTDGSTIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQRRHGYVRGIPRQSAFVIVKEFLANLPFGEKGHFLWLAEGLDGSFLVFVMQWQGVNKGIVAEYLLQTMKEKGMLPDFVLCIGDDRSDEDMFEVIMNAKASLSPGAEVFGCTVGQKPSKARYYLEDTHEILRMLQGLTHASEHATRAAPQTTARRVVIAESK 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 31591146 31595636 + MELO3C013838.2.1 Cme06g02456 331605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02456 916 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 757 - -
Cme06g02456 916 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 806 898 - -
Cme06g02456 916 Pfam Trehalose-phosphatase 597 756 IPR003337 GO:0003824|GO:0005992
Cme06g02456 916 Pfam Trehalose-phosphatase 806 881 IPR003337 GO:0003824|GO:0005992
Cme06g02456 916 Gene3D Glycogen Phosphorylase B; 56 314 - -
Cme06g02456 916 CDD HAD_TPP 595 883 - -
Cme06g02456 916 SUPERFAMILY HAD-like 805 891 IPR036412 -
Cme06g02456 916 Gene3D - 677 756 - -
Cme06g02456 916 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Cme06g02456 916 SUPERFAMILY HAD-like 594 756 IPR036412 -
Cme06g02456 916 Gene3D Glycogen Phosphorylase B; 315 531 - -
Cme06g02456 916 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Cme06g02456 916 Gene3D - 783 906 IPR023214 -
Cme06g02456 916 Gene3D - 596 757 IPR023214 -
Cme06g02456 916 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Cme06g02456 916 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 806 898 IPR001830 GO:0003824|GO:0005992
Cme06g02456 916 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 757 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02456 Cme-Chr6:31591146 Cme08g00207 Cme-Chr8:1392770 0 dispersed
Cme06g02456 Cme-Chr6:31591146 Cme10g00508 Cme-Chr10:3271116 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02456 K16055 - csv:101207192 1689.86