Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g02479 | ATGGCTGGGTTGGATTTAGGGAGTCGATATCTAACTCACCTTCAACCACAAGTAGACGGCGGTCATTTCTCCTCCGGTGACCACCAAGACGATGACGATCCCCACCAAACCCTAGGTGGTACGGGGGATGTCGTTGGCCGACGTCCACGCGGTCGGCCACCCGGTTCGAAAAACAAGCCAAAGCCGCCGGTTATCATCACCCGTGAGAGCGCCAACACGCTTCGTGTCCACATCTTAGAAGTTGGCAGCGGCTGTGATGTTTTCGATTGCGTCGCTTCCTACGCCCGCCGACGACAGCGTGGGATCTGTATTTTGAGCGGTAGCGGTAACGTCACCAACGTCGGTCTCCGCCAGCCAGCAGCAGCTGGGGTGTTGACTCTTCAAGGGAGGTTTGAAATTTTGTCACTGTCGGGATCGTTTCTGCCGCCGCCTGCTCCACCCGGTGCGACGAGTTTGACGATATTTTTAGCCGGAGGGCAGGGGCAAGTAGTGGGAGGGACGGTGGCTGGTGAATTGACGGCGGCCGGGCCGGTGATTTTGATTGCAGCTTCGTTTACGAATGTGGCGTATGAGAGATTGCCATTGGATGAGGAGGATCAGCAACAAACTCCTGCAGGCGGCGGAGGGAGCGGCGGCGGAGTTGGTAACAACAACAATAATAATCCGTTTCAAGACCCAACAAATTCAGGACTTCCATTCTTGAATTTGCCACTTCATATGCAAAATGTTCAACTTCCACCCTTTTGA | 747 | 54.62 | MAGLDLGSRYLTHLQPQVDGGHFSSGDHQDDDDPHQTLGGTGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDVFDCVASYARRRQRGICILSGSGNVTNVGLRQPAAAGVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFTNVAYERLPLDEEDQQQTPAGGGGSGGGVGNNNNNNPFQDPTNSGLPFLNLPLHMQNVQLPPF | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 31767235 | 31768221 | - | MELO3C013857.2.1 | Cme06g02479 | 331628 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g02479 | 248 | ProSiteProfiles | PPC domain profile profile. | 71 | 207 | IPR005175 | - | |
Cme06g02479 | 248 | MobiDBLite | consensus disorder prediction | 16 | 65 | - | - | |
Cme06g02479 | 248 | MobiDBLite | consensus disorder prediction | 199 | 232 | - | - | |
Cme06g02479 | 248 | Gene3D | - | 74 | 203 | - | - | |
Cme06g02479 | 248 | PIRSF | ESCAROLA | 9 | 244 | IPR014476 | GO:0003680 | |
Cme06g02479 | 248 | CDD | DUF296 | 75 | 185 | IPR005175 | - | |
Cme06g02479 | 248 | MobiDBLite | consensus disorder prediction | 203 | 232 | - | - | |
Cme06g02479 | 248 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 75 | 187 | IPR005175 | - | |
Cme06g02479 | 248 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 32 | 247 | IPR014476 | GO:0003680 | |
Cme06g02479 | 248 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 | 32 | 247 | - | - | |
Cme06g02479 | 248 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 71 | 200 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g02479 | Cme-Chr6:31767235 | Cme11g02481 | Cme-Chr11:31446850 | 2.77E-92 | dispersed | |
Cme04g00106 | Cme-Chr4:850979 | Cme06g02479 | Cme-Chr6:31767235 | 1.38E-86 | wgd | |
Cme06g00302 | Cme-Chr6:1851064 | Cme06g02479 | Cme-Chr6:31767235 | 1.51E-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g02479 | - | - | csv:101210132 | 429.869 |