Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02562 ATGAAGAGAGAAACAATGGAAGATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAGTTTGTATATGCAGGAAACTCTGTTTTTATGAGTTTTCTTATGTCTTTGGGGATTGATCCTTTAACCCTTGTTATCTTCTCTACCTTCTCTACTTTTCTCATTGTCTCTCCGGTTGCTGTTTATTTTGAAAGTTTGAAGAATTTGGATGATGAAACAGAGAAGTTCATGGTTTTCTGCAGGTATAGCTGGCCAAAGAAACTTAGTCTAAAGTTGATCCTTCAGCTTGTTCTCATATCCTTTGGAGGGGTTACATTGTTTCAGTCCCTTTTACTGAAAGGCATACAGCTAACTTCGCCGACGTTAGCTACGGCGATGCCGAATCTCGCTCCTGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAGGTTCAGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACACTTCTATGTGTGATAGGCGCATTCACCATGAGCGTAATGCACAGTGCTTCATCGGATACAGCAGGAAAAGATAGTGTCCCACGACAATCACCTCTGAGCGAGCATATGTTCGATGAACAGAAGATCCTCGGTTGCGCATATCTCTTCTCGGCTATCATTATTTTATCTAGCGTAGTTGTTCTGCAGGCATCGACACTAGGCGATTTCCCGGCACCAATGTCGTTGTGTGCAATAACATCCCTCATTGGAGTGCTCTTAACCATAGGTGTACAGATAGTTCAATATCACAGAATTGATATTGCTTGGCCACTTCTAATCAGTGTTAAAGAATTGGCTGCCTATGTTATTGTGGGTGGAACGATAAGTGGCGCTTGCGTGAGCTTCAACGGGTGGGCGATGAAGAAACGAGGGCCAGTTTTAGTGTCAATGTTTAGTCCGATAGGAACAGTTTGTTCGCTCGTTCTCTCAGTTGTCACCTTAGGAGAATCCATCAATATCGGAAGCCTTGCTGGTATGTTCATGATGTTCACCGGCCTCTACTTCGTCCTATGGGCGAAAGGGAAGGAACGTTACGTGAGCCTAAACCATCTTGAGAGTGAGTTCGACGTTGACAAGCCTCTTTTAAGTTGA 1104 43.21 MKRETMEDFAIMSGLVGVQFVYAGNSVFMSFLMSLGIDPLTLVIFSTFSTFLIVSPVAVYFESLKNLDDETEKFMVFCRYSWPKKLSLKLILQLVLISFGGVTLFQSLLLKGIQLTSPTLATAMPNLAPGLIFAIAWIFRLEKVQLSCIYSKIKILGTLLCVIGAFTMSVMHSASSDTAGKDSVPRQSPLSEHMFDEQKILGCAYLFSAIIILSSVVVLQASTLGDFPAPMSLCAITSLIGVLLTIGVQIVQYHRIDIAWPLLISVKELAAYVIVGGTISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLVLSVVTLGESINIGSLAGMFMMFTGLYFVLWAKGKERYVSLNHLESEFDVDKPLLS 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 32625362 32628207 + MELO3C013934.2.1 Cme06g02562 331711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02562 367 PANTHER OS11G0588100 PROTEIN 10 367 - -
Cme06g02562 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 265 346 - -
Cme06g02562 367 Pfam EamA-like transporter family 202 341 IPR000620 GO:0016020|GO:0016021
Cme06g02562 367 PANTHER WAT1-RELATED PROTEIN 10 367 IPR030184 GO:0016021|GO:0022857
Cme06g02562 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 78 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02562 Cme-Chr6:32625362 Cme10g00878 Cme-Chr10:6168596 3.37E-39 dispersed
Cme06g02562 Cme-Chr6:32625362 Cme09g01613 Cme-Chr9:20909807 3.33E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02562 - - cmo:103490881 653.669