Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02664 ATGGCTGGTCGTATATTTGAAACTTTGTCCTTTGGTGGGTCTCAACATGGTCAAGGTAATCAATCTTTGCCATTTTCATCTGGAAATACTTCATTGAAGATCTTACTGTTACATGGTTATTTAGACATTTGGGTTAAGGAAGCTAAGAACCTTCCCAATTTGGATATGTTTCACAAGACTCTTGGGGATATGTTTTCAAAAGTGTCTTTTAAGGGTTCAAAAAACAGTGATGGGGAGAAGCCTCCAAAAGTTACTAGTGATCCTTATGTGACCGTTTCTGTATCGAATGCTGTAATTGGAAGAACTTTTGTGATTGATAATAGTGAAAATCCTGTTTGGATGCAACATTTTAATGTCCCTGTTGCTCATTATGGTGCTGAAGTGCATTTTGTTGTTAAAGACCATGATGTTGTAGGTTCACAAATCATGGGTGTTGTTGCAATTCCTGTTGAACAATTGTATTCAGGAGCCATAGTTGAAGGAACCTACCCAATTTTGAATAGTAGTAGGAAGCCCTGTAAGCCTGGGGCAGTCTTGAGTTTGTCGATTCAGTATACTCCGGCTGACCGTGCGGCCATTTTTCAAGGTGGAATGTATGCGTCTCCTGACCACCAGGGAGTTATAGGCACATATTTTCCTCTTAGGAAGGGAGGTAAAGTTACACTGTACCAAGATGCTCATGTTGAAGAGGGTTGTCTTCCAACAGAATTTAGGCTTCATGGTGGAGTTCAATATGAACATAGGAGCTGTTGGGACGATATATCTGAATCGATCAGTCAGGCTCGCCGTTTGATCTATATTACGGGCTGGTCTGTATACCATAGTGTTAAATTGGTTAGAGATGGAACAAGAAAAGAATGCATATTAGGGGACCTTCTTAAAGCCAAGTCCCAAGAAGGAGTAAGAGTATTGCTTCTTATTTGGGATGATCCAACTTCAACTAGTATGTTGGGATATAAAACGGTTGGGATGATGAATACAAATGATGAGGAGACTCGTCGATTTTTTAAGAACTCGTCAGTCCAAGTGGTTTTGTGCCCACGATCCGGTGGAAAAGGTCATAGTTGGCTTAAAAAACAGGAAGCTGGAACCATCTATACTCACCATCAGAAGACAGTTATTGTAGATGCTGATGCTGGAAATTACAAAAGAAAAATTGTAGCTTTTGTTGGTGGTCTTGATTTATGTTTGGGCCGATATGATACCTCAAGACATCCTCTTTTTCGGACATTGCAAACTACACATGTGGATGACTTCCATAACCCTAATTTTACGGGTCCAACTACTGGCTGTCCAAGAGAACCATGGCATGATTTGCACTCTAAGATTGACGGTCCAGCGGCATATGACGTACTTGCAAATTTTGAGGAGCGTTGGATGAGAGCTTCAGAGCCTCATGGCCTTAAAAGACTAAAGAAGTTACATGAAGATGTATTACTCAAAATTGAAAGAATTCCTGAAATTTTGGGGATTGCTGATGTTTCTCAAATGTGTAATAATGATCCAGAAGGTTGGAACGTCCAGATTTTTCGCTCAATCGATTCCAACTCTGTAAAAGGGTTTCCTGACAAGCCAAGAGATGCCATAAGTAGGAACTTAGTATGTGGAAAGAATGTGATGATAGACATGAGTATACATTCAGCATATGTTAGTGCAATTCGAGCTGCTCAACGCTTCGTTTACATTGAAAACCAATACTTCCTTGGGTCATCTTATAATTGGAGTGCTCACAAAGACTTGGGGGCTAATAACTTAATACCAATGGAAATTGCCCTTAAGATTGTGGAGAAAATCAAAGCTAAAGAAAGATTTTCAGCTTATGTGGTTATTCCAATGTGGCCAGAAGGTGTTCCTACAAGCACTCCTATTCAAAGAATTCTTTTCTGGCAGAGTAGGACAATGCAAATGATGTATGAAATGATATATCAAGCGTTAGAGGAGGTTGGACTTCACAAAACATATGAACCTCAAGACTACTTAAATTTCTTTTGTCTTGGAAACCGTGAGGTGCTTGGTGTGAGAGACGGTGTTGAAGCCGGGAATGGAGAAAAGAATGCTCAATCACTTGTTCGTAAGAGTCGACGCTTTATGATCTATGTTCATTCTAAAGGAATGATAGTAGATGATGAGTACGTCTTACTAGGATCAGCAAATATCAATCAACGGTCCCTTGAAGGTACCAGAGACACTGAAATAGCAATGGGCGCATATCAACCTCGTCATACATGGTCATCAAGCAAACGCTCAAGCCCACGTGGTCAGGTGTTTGGATATAGAATGTCATTATGGGCAGAGCACACAGGAACAATGGAGGAATGTTTTGAAAGACCAGAGAGTATTGAATGTGTAAGAAGAATGAGGTCATTGGGTGAGAGAAATTGGAGACAATATGCAGCTGAGGAAGTGAGTGAAATGAGAAGTCATCTTCTTAAATATCCATTACAAGTTGATCCAACTGGTAAGGTCACCCATCTTCCTGGCTCTGAATCCTTCCCTGACCTTGGTGGCAACATATTGGGAACATTCACAGTCATACAAGAAAATCTTACAATTTGA 2556 40.34 MAGRIFETLSFGGSQHGQGNQSLPFSSGNTSLKILLLHGYLDIWVKEAKNLPNLDMFHKTLGDMFSKVSFKGSKNSDGEKPPKVTSDPYVTVSVSNAVIGRTFVIDNSENPVWMQHFNVPVAHYGAEVHFVVKDHDVVGSQIMGVVAIPVEQLYSGAIVEGTYPILNSSRKPCKPGAVLSLSIQYTPADRAAIFQGGMYASPDHQGVIGTYFPLRKGGKVTLYQDAHVEEGCLPTEFRLHGGVQYEHRSCWDDISESISQARRLIYITGWSVYHSVKLVRDGTRKECILGDLLKAKSQEGVRVLLLIWDDPTSTSMLGYKTVGMMNTNDEETRRFFKNSSVQVVLCPRSGGKGHSWLKKQEAGTIYTHHQKTVIVDADAGNYKRKIVAFVGGLDLCLGRYDTSRHPLFRTLQTTHVDDFHNPNFTGPTTGCPREPWHDLHSKIDGPAAYDVLANFEERWMRASEPHGLKRLKKLHEDVLLKIERIPEILGIADVSQMCNNDPEGWNVQIFRSIDSNSVKGFPDKPRDAISRNLVCGKNVMIDMSIHSAYVSAIRAAQRFVYIENQYFLGSSYNWSAHKDLGANNLIPMEIALKIVEKIKAKERFSAYVVIPMWPEGVPTSTPIQRILFWQSRTMQMMYEMIYQALEEVGLHKTYEPQDYLNFFCLGNREVLGVRDGVEAGNGEKNAQSLVRKSRRFMIYVHSKGMIVDDEYVLLGSANINQRSLEGTRDTEIAMGAYQPRHTWSSSKRSSPRGQVFGYRMSLWAEHTGTMEECFERPESIECVRRMRSLGERNWRQYAAEEVSEMRSHLLKYPLQVDPTGKVTHLPGSESFPDLGGNILGTFTVIQENLTI 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33733869 33740048 + MELO3C014016.2.1 Cme06g02664 331813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02664 851 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 37 187 IPR035892 -
Cme06g02664 851 SUPERFAMILY Phospholipase D/nuclease 533 783 - -
Cme06g02664 851 PANTHER PHOSPHOLIPASE D 6 851 IPR015679 -
Cme06g02664 851 PIRSF PLD_plant 26 851 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cme06g02664 851 Gene3D C2 domain 34 171 IPR035892 -
Cme06g02664 851 Pfam Phospholipase D Active site motif 365 399 IPR001736 GO:0003824
Cme06g02664 851 Pfam Phospholipase D Active site motif 697 723 IPR001736 GO:0003824
Cme06g02664 851 Gene3D Endonuclease Chain A 239 478 - -
Cme06g02664 851 Gene3D Endonuclease Chain A 511 753 - -
Cme06g02664 851 SUPERFAMILY Phospholipase D/nuclease 209 464 - -
Cme06g02664 851 Pfam C2 domain 39 165 IPR000008 -
Cme06g02664 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 364 399 IPR001736 GO:0003824
Cme06g02664 851 CDD C2_plant_PLD 35 186 - -
Cme06g02664 851 ProSiteProfiles C2 domain profile. 15 163 IPR000008 -
Cme06g02664 851 SMART C2_3c 40 162 IPR000008 -
Cme06g02664 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 696 723 IPR001736 GO:0003824
Cme06g02664 851 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 6 851 - -
Cme06g02664 851 Pfam Phospholipase D C terminal 771 841 IPR024632 -
Cme06g02664 851 SMART pld_4 696 723 IPR001736 GO:0003824
Cme06g02664 851 SMART pld_4 364 399 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02664 Cme-Chr6:33733869 Cme11g02535 Cme-Chr11:31792866 0 dispersed
Cme06g02664 Cme-Chr6:33733869 Cme03g01617 Cme-Chr3:25062581 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02664 K01115 - csv:101208016 1709.12