Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02716 ATGGAATACTTCTCTTATATTGTTTCTCCATTACTATTGTTTTTCTTTTTGCTTCAAACATCTGCCCTTCCTACCAAAAAGTCTTACATTGTTTATTTGGGAGCGCATTCGTTCGGACCGAACCCTACAAACTTTGACATCGAAGCAGCAACCGAGTCACATTATGATCTATTAGGATCAGTAGTGGGAAACAATTTGGAAGCCAAAGATTCAATTAAGTATTCTTACAATAAATACATTAATGGTTTTGCTGCTGTTCTTGATGAGCAACAAGCCACGGATCTTGCAAAGAATCCAAAGGTGGTGTCGGTTTTTGAAAACAAGAAAAGACAATTGCATACAACACGATCATGGAGTTTTCTTGGAATGGAAAATGATGAAGGAATTCCTTCAAACTCCATTTGGAAAGCTGCAAGGTTTGGTGAAGATACAATTATAGGCAACCTTGACTCAGGTGTTTGGCCAGAGTCGAAGAGCTTCAACGATGCAGGCTATGGTCCTGTTCCTTCAAGGTGGAGGGGAGCTTGTGAAGGTGGCAACAACTTTCAATGCAATAGGAAGTTGATTGGAGCAAGGTATTTCCACGCAGGATTTGTAATGGGAAGTGGTCTTATCAACGTTAGCTTCAATAAGACAGCAAGAGATGAAGATGGCCATGGTTCACACACTTTATCCACAGCCGGAGGCAACTTTGTCCCCGGAGCCAGTATATTTGGCTATGGCAATGGAACTGCAAAAGGAGGTTCCCCAAAAGCTCGTGTTGCTGCCTACAGGGTTTGCTGGCCTCCGGCTTTATTTGGTGGTGGCTGTTACGATGCTGATATCTTAGCCGGTTTTGAAGCCGCCATTAGTGATGGTGTCGATGTTCTCTCCGTCTCTCTTGGTAGCGAAGCTCAAGAGTTTTCTCATGATTCCATGTCCATAGGGGCATTCCATGCTGTTGAACAAGGAATCGTCGTGGTTTGCTCTGCTGGAAATAGTGGTCCGGGTCCCAAGACTGTAAGCAATGTATCTCCTTGGATGTTCACTGTCGGAGCTAGCACCATCGATCGAGATTTCACAAGTTATGCTACCCTTGGAAACAAGAAGCAATATAAGGGTTCAAGTCTTTCATCGAGTTCATTGGCTGGTGGTAAATTCTACCCTTTGATAAATGCTGTAGATGCAAGAAATCCTAATTCGACCGACAGCTTTGCGCAAAAATGCGAGACGGGATCGCTTGATCCAGCAAAGGTAAAAGGGAAGATTGTAGTTTGTCTTCGAGGAGTAACTGCAAGAGTTGAGAAAGGTTATGTTGTTCTTCAAGCTGGTGGTGTTGGTATGATTTTAGTGAATGACAAGACCGATGGATCAGGCCTTATTTCTGATTCCCATATACTTCCTGCCACTAGTCTTACCTACACCGATGGACTTGCTGTTGCTCAATATATTAACTCCACCACAACACCCGTTGCTCTCATAACACCTGTAGAGACTCAGTTAGGAGTTAAACCATCACCTGTCATGGCTGGCTTCTCATCAAGAGGCCCTAATCCCATCACTGACGCCATGCTCAAGCCTGATATAACAGGACCGGGAGTGAATATTCTCGCATCGGTCACAACAGATGTAACTGCAACGAAATTTCCATTCGATACGCGTCGGGTGCCTTTCAACGTTGAATCGGGCACTTCCATGTCTTGCCCACACATCGCAGGTGTTTCTGGTCTTCTCAAGACTCTTTATCCAACATGGAGTCCAGCAGCTATCAAATCTGCCATCATGACTACAGCCAAAACAAGAGACAACTCCATGCATACATTATCAGACACCGTGAAGGCGAAGGCAACCCCATTTGATTATGGTGCAGGACATGTGAATCCCAATAATGCAATGGACCCCGGCCTCGTTTACGACACAACCATCGACGATTACTTGAACTTCTTATGTGCACGTGGCTACAACGCCCAAACTCTGATGAGTTTCCACAGCAAACCATTTGTGTGCGCAACACCGTTCACATTGACCGATCTCAACTACCCATCAATCTCGATCCCAGAGTTGAAATCCGGTGCCCCAGTAACGGTGAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACATACGTGGCACGTGTGAAGGCATCCTCAAAGATCTCAGTTACGGTTGAGCCGAGTACGTTGCAGTTTAATAGTGTGGGAGAAGAGAAGGCTTTCAAGGTTCTGTTTGAATACAAAGGAACAGGACAAGGTAAAAGCTATGTGTTTGGGACATTGATATGGTCTGATAATGGGAAGCATAATGTTAGAAGTCCTATTGTAGTGAAATTGGGATCTTACATTGTTTATTTGGGGTCGCACTTTTTCGGATCAAATCCTTCTATACATGATGTTCAACTTGCAACGGAGTCCCAATACGAATTATTAGAATCAGTCGTGGGAAGCAAATTGGCAGCCAAAGAATCGATTTTCTATTCGTATAATAGATACATCAATGGCTTTGCTGCCATACTTGATGAAAACCAAGCCATTGCTCTTGCAAGGAACCCAAATGTGGTGTCGATTTTCGAAAACCAGAAAAGAAAATTGCATACAACAAGATCATGGAGTTTTCTTGGCATGGAGAGTGATGAAGGAATTCCTCCAAACTCCATCTGGAAAGCTGCAAGGTTTGGGGAAGATACTATTATTGGAAATCTTGACACTGGTGCTTGGCCAGAGTCGAAGAGCTTCAATGATGCAGGCTATGGTCCTGTTCCTTCAAGGTGGATGGGAGTTTGTGAAGGTGGCGCCAACTTTACTTGCAACAAGAAGTTGATTGGAGCAAGATATTTCAACAAAGGATTTGAAGCTGAGAATGGCCCTATGAGTGCTAACTTAACCACTGCAAGAGACCAAGAAGGCCATGGATCCCACACTTTGTCAACAGCCGGAGGCAACTTTGTCCCCGGAGCCAATGTCTTTGGCAATGGCAATGGCACTGCAAAAGGAGGATCCCCTAGAGCTCGTCTTGCTGCCTACAAGGTATGCTGGCCGAGCTTCACGGGTGGTTGTTATGACGCTGACATCCTAGCCGCTGTTGAATCTGCCATTCATGACGGTGTTGATGTTCTCTCTATCTCTCTTGGTTCATCTGCTAGAGATTTTGCTTCTGACACCCTTTCGATAGGAGCCTTTCACGCCGTTCAACAAGGAATTGTTGTGGTTTGCTCCGGAGGAAATGACGGTCCGACTCCTGGGACTGTAACCAATGTATCTCCTTGGATGATCACGGTTGCTGCTAGTACCGTCGATCGAGACTTCGTCAATTATGTCGCCCTCGGAAACAAGAGACATTTCAAGGGGGTAAGTCTTTCATCTGGAGGGTTACCAAGGGGTAAATTCTACCCTTTGGTGGATGGTGTGCAAGTCAAAGCGGGCAATGCTACTGATAAGCTTGCCCTACTTTGTGAGGATGGATCACTTGATCCAGCAAAGGCAAAAGGGAAGATAGTACTTTGCCTTAGAGGAGACAGTGCAAGAATGGATAAGAGTTTCGAGGTTCGTCGTGCCGGTGGCATTGGTTTGATTCTTGTCAATGACAAGGAAGATGGAAATGATATTACAGCTGATCCTCACTTTCTTCCTGCTTCTCATTTGAACTATGCTGATGGAATTGCCATCTTTCAATATATCAACTCCACCAAATCACCAATGGCTTTCATAACCCATGTAAAGACTGAGATGGGAATCAAACCATCACCAATGGTGGCTGATTTCTCATCAAGAGGCCCTAATCCCATCATAGACTCCATGATCAAGCCCGATATTGCAGCTCCCGGTGTGAGTATACTCGCAGCATTCTCCGAATATGCAACGGCGACAGATTTTCCACTCGACACACGTCGGGTGTCTTTTAACTTTGAATCAGGTACTTCTATGGCTTGTCCACACATCTCAGGTGTTGTTGGCCTTCTCAAGACCCTTTATCCCAAATGGAGCCCTGCAGCCATCAAATCTGCTATCATGACTACAGCCAAAACAAGAGACAACTCCATGAAGTCAATATTGGACTACAACAAAGCCAAGGCAACCCCATTTCAATATGGAGCAGGACATGTCCATCCAAACAATGCAATTGACCCTGGCCTTGTTTATGACACCACCATTGAAGATTACATGAACTTCATATGTGCTCAAGGCTACAACTCGACCACACTCAAGAGATTCTATAACAAGCCATACCTTTGCCCAAAATCGTTCCCACTCACAGATCTCAACTACCCCTCAATCTCAGTTCCGAAGTTGACGATCGGTGTGCCCGTGACGATCAATAGAAGACTTAAGAATGTGGGAACCCCAGGAACGTACGTCGCACGAGTGAAGGTGTCCTCAAAGGTCTCGGTTACAGTCAAGCCGAGTACGTTGCAATTTAATAGTGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTGAATACAAAGGAAAAGGACAAGGTAAAGGCCATGTGTTTGGGACATTGATATGGTCAGATGGAAATCATTTTGTTAGAAGTCCTATGGCAGTGAAATTGGGATGA 4536 44.86 MEYFSYIVSPLLLFFFLLQTSALPTKKSYIVYLGAHSFGPNPTNFDIEAATESHYDLLGSVVGNNLEAKDSIKYSYNKYINGFAAVLDEQQATDLAKNPKVVSVFENKKRQLHTTRSWSFLGMENDEGIPSNSIWKAARFGEDTIIGNLDSGVWPESKSFNDAGYGPVPSRWRGACEGGNNFQCNRKLIGARYFHAGFVMGSGLINVSFNKTARDEDGHGSHTLSTAGGNFVPGASIFGYGNGTAKGGSPKARVAAYRVCWPPALFGGGCYDADILAGFEAAISDGVDVLSVSLGSEAQEFSHDSMSIGAFHAVEQGIVVVCSAGNSGPGPKTVSNVSPWMFTVGASTIDRDFTSYATLGNKKQYKGSSLSSSSLAGGKFYPLINAVDARNPNSTDSFAQKCETGSLDPAKVKGKIVVCLRGVTARVEKGYVVLQAGGVGMILVNDKTDGSGLISDSHILPATSLTYTDGLAVAQYINSTTTPVALITPVETQLGVKPSPVMAGFSSRGPNPITDAMLKPDITGPGVNILASVTTDVTATKFPFDTRRVPFNVESGTSMSCPHIAGVSGLLKTLYPTWSPAAIKSAIMTTAKTRDNSMHTLSDTVKAKATPFDYGAGHVNPNNAMDPGLVYDTTIDDYLNFLCARGYNAQTLMSFHSKPFVCATPFTLTDLNYPSISIPELKSGAPVTVNRRVKNVGTPGTYVARVKASSKISVTVEPSTLQFNSVGEEKAFKVLFEYKGTGQGKSYVFGTLIWSDNGKHNVRSPIVVKLGSYIVYLGSHFFGSNPSIHDVQLATESQYELLESVVGSKLAAKESIFYSYNRYINGFAAILDENQAIALARNPNVVSIFENQKRKLHTTRSWSFLGMESDEGIPPNSIWKAARFGEDTIIGNLDTGAWPESKSFNDAGYGPVPSRWMGVCEGGANFTCNKKLIGARYFNKGFEAENGPMSANLTTARDQEGHGSHTLSTAGGNFVPGANVFGNGNGTAKGGSPRARLAAYKVCWPSFTGGCYDADILAAVESAIHDGVDVLSISLGSSARDFASDTLSIGAFHAVQQGIVVVCSGGNDGPTPGTVTNVSPWMITVAASTVDRDFVNYVALGNKRHFKGVSLSSGGLPRGKFYPLVDGVQVKAGNATDKLALLCEDGSLDPAKAKGKIVLCLRGDSARMDKSFEVRRAGGIGLILVNDKEDGNDITADPHFLPASHLNYADGIAIFQYINSTKSPMAFITHVKTEMGIKPSPMVADFSSRGPNPIIDSMIKPDIAAPGVSILAAFSEYATATDFPLDTRRVSFNFESGTSMACPHISGVVGLLKTLYPKWSPAAIKSAIMTTAKTRDNSMKSILDYNKAKATPFQYGAGHVHPNNAIDPGLVYDTTIEDYMNFICAQGYNSTTLKRFYNKPYLCPKSFPLTDLNYPSISVPKLTIGVPVTINRRLKNVGTPGTYVARVKVSSKVSVTVKPSTLQFNSVGEEKAFKVVFEYKGKGQGKGHVFGTLIWSDGNHFVRSPMAVKLG 1511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34362140 34377474 + MELO3C014071.2.1 Cme06g02716 331865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02716 1511 SUPERFAMILY Subtilisin-like 856 1370 IPR036852 GO:0004252|GO:0006508
Cme06g02716 1511 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 27 771 - -
Cme06g02716 1511 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 771 1511 - -
Cme06g02716 1511 SUPERFAMILY Subtilisin-like 112 629 IPR036852 GO:0004252|GO:0006508
Cme06g02716 1511 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 770 857 IPR037045 -
Cme06g02716 1511 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Cme06g02716 1511 Pfam Fibronectin type-III domain 670 768 IPR041469 -
Cme06g02716 1511 Pfam Fibronectin type-III domain 1411 1508 IPR041469 -
Cme06g02716 1511 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Cme06g02716 1511 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cme06g02716 1511 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Cme06g02716 1511 ProSiteProfiles Serine proteases, subtilase domain profile. 861 1366 - -
Cme06g02716 1511 Gene3D - 1091 1235 - -
Cme06g02716 1511 Gene3D - 350 494 - -
Cme06g02716 1511 SUPERFAMILY PA domain 1130 1239 IPR046450 -
Cme06g02716 1511 CDD PA_subtilisin_like 1097 1228 - -
Cme06g02716 1511 ProSitePatterns Serine proteases, subtilase family, serine active site. 1297 1307 IPR023828 -
Cme06g02716 1511 CDD Peptidases_S8_3 855 1332 IPR034197 -
Cme06g02716 1511 Pfam Subtilase family 885 1358 IPR000209 GO:0006508|GO:0008236
Cme06g02716 1511 Pfam Subtilase family 142 603 IPR000209 GO:0006508|GO:0008236
Cme06g02716 1511 CDD PA_subtilisin_like 356 487 - -
Cme06g02716 1511 Pfam Peptidase inhibitor I9 772 857 IPR010259 -
Cme06g02716 1511 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Cme06g02716 1511 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Cme06g02716 1511 CDD Peptidases_S8_3 111 591 IPR034197 -
Cme06g02716 1511 Pfam PA domain 400 472 IPR003137 -
Cme06g02716 1511 Pfam PA domain 1139 1213 IPR003137 -
Cme06g02716 1511 Gene3D Peptidase S8/S53 domain 143 638 IPR036852 GO:0004252|GO:0006508
Cme06g02716 1511 Gene3D Peptidase S8/S53 domain 887 1379 IPR036852 GO:0004252|GO:0006508
Cme06g02716 1511 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 771 1511 IPR045051 -
Cme06g02716 1511 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 771 IPR045051 -
Cme06g02716 1511 ProSiteProfiles Serine proteases, subtilase domain profile. 117 625 - -
Cme06g02716 1511 Gene3D - 642 769 - -
Cme06g02716 1511 Gene3D - 1383 1510 - -
Cme06g02716 1511 SUPERFAMILY PA domain 409 470 IPR046450 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01479 Cme-Chr3:24014795 Cme06g02716 Cme-Chr6:34362140 1.18E-171 dispersed
Cme06g02716 Cme-Chr6:34362140 Cme06g02720 Cme-Chr6:34411012 0 dispersed
Cme06g02716 Cme-Chr6:34362140 Cme06g02719 Cme-Chr6:34404997 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02716 - - csv:101212014 2160.19