Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02719 ATGGCTGAGGAAGCGATTTTCTACTCATATACAAGAAGTTTCAATGGTTTCGCTGCCATACTTGATGACAAAGAAGCTGAAAATCTAGCAAGAAACCCTAAGGTGATATCAGTGTTTGAAAATAAGGCAAGAAAATTGCACACAACACGTTCTTGGAACTTTCTTGGAGTGGAAAATGATATCGGAATTCCTTCAAATTCCATTTGGAATGCTGCAAAGTTTGGTGAAGATGTAATCATAGCCAACATTGACACAGGTGTTTGGCCAGAATCAAAGAGCTTTAGTGATGAAGGGTATGGACCTGTGCCATCAAAATGGAGAGGCATTTGTCAAACTGACTCCAACTTCCATTGCAATAGGAAGCTTATTGGAGGAAGATATTTCCACAAAGGATATGAAGCAGCCGGAGGCAAACTCAACGCCACTTTACTCACCGTACGCGACCACGACGGCCATGGAACCCACACTCTCTCAACCGCTGCCGGAAACTTTGTCACCGGAGCCAACGTTTTTGGCCATGGTAATGGCACGGCCAAAGGTGGTGCTCCGAAGGCTCGCGCCGTTGCCTACAAGGTCTGCTGGCCTCCGCTCTTTGACTCACAATGCTTCGACGCCGATATTCTTGCCGCCTTCGAAGCCGCTATTGCCGATGGAGTCGACGTGCTATCAACTTCCCTTGGTGGAGCAGCCGACGAATATTTCAACGATCCACTTGCTATCGCCGCCTTCCTCGCCGTTCAACGAGGCATTCTCGTTGTCTTCTCTGGTGGCAATTCCGGTCCTTTCCCAATGACCGTCACCAATGTTTCCCCTTGGGTATTCACCGTCGCGGCCAACACCATAGACAGAGATTTCGTCAGTTATGTGGGGCTTGGAAACAAGAAACACGTCAAGGGTGTAAGCCTTTCTTCAGTTGCTTCATTACCAAAGAAGTTCTATCCATTGATCAATTCAGTGGATGCAAAATTCAGCAATGTCACCGAATTCCATGCTCAATTTTGCGGCAAGGGGACGCTTGATCCAATGAAAGTAAAGGGAAAGATAGTGATTTGTCAAGTAGGGGAGACCGAAGGAGTAGACAAGGGCTACCAAGCTTCTCTAGCTGGTGCCGCAGGAGTAATTGTAGCTAACGATATCGAAAAAGGAGACGAAATCTATCCCGAATTACACTTCATTCCCGCTTCGGATATTACGAATACCGACGCACAAATAGTCCAAAAGTACCTCAAATCCACCAAAACACCAATAGCTCATTTAACCAGTGTCAAAACATTGTTGAGTGTCAAACCAGCTCCAATCATTGCTACCTTCTCATCTAGAGGCCCCAACCCAATTGATAGTACCATTCTCAAGCCTGATGTCACAGCCCCTGGTGTGAATATACTGGCTTCTTATCCCACTGGAATTGCTCCGACGTTCTCCGCTGCTGACCGGCGGCGTATCCCATTTAATGTTATCTCTGGTACTTCCATGTCTTGTCCTCACGTTGCCGGTATCGCCGGTCTTGTTAAGTCCATTCATCCTAATTGGAGCCCTGCTGCTATCAAATCTGCTATTATGACTACTGCCAAAACAAGAGGCAACAACAACCAAACAATCCTCGACTCAACGAAACTCAAGGCCACACCTTACGCTTATGGTGCAGGACAAGTATATCCAAACGATGCAGCGGACCCCGGCCTTGTTTATGATATCACTATTAATGACTACTTAAACTTCTTGTGCGCTCGAGGCTACGATGCAATGAAAATTAAAAAATTCTATGCTAAGCCATTTAACTGTGTTAGATCGTTCAAAGTCACGGATCTCAACTACCCGTCGATCTCGGTCGGGGAGCTGAAAATTGGTGCTCCTTTGACAATCAATAGAAGAGTTAAGAACGTGGGAAGTCCAGGGACGTATGTCGCACGGGTCAAAGCGTCACCCGGTGTTGCGGTTACGATCGAGCCGAGCACGTTGGTGTTTAGAAGTGTGGGTGAAGAGAAGGGGTTTAAGGTTGTATTGCAAAACACAGGAAAAGTGAAAAGTGGAGATGTGTTTGGAACATTGATTTGGTCTGATGGGAAGCACTTTGTTAGAAGTCCCATTGCTGTGCATTTGGGACCCGGCATTGGAAATTAA 2121 46.44 MAEEAIFYSYTRSFNGFAAILDDKEAENLARNPKVISVFENKARKLHTTRSWNFLGVENDIGIPSNSIWNAAKFGEDVIIANIDTGVWPESKSFSDEGYGPVPSKWRGICQTDSNFHCNRKLIGGRYFHKGYEAAGGKLNATLLTVRDHDGHGTHTLSTAAGNFVTGANVFGHGNGTAKGGAPKARAVAYKVCWPPLFDSQCFDADILAAFEAAIADGVDVLSTSLGGAADEYFNDPLAIAAFLAVQRGILVVFSGGNSGPFPMTVTNVSPWVFTVAANTIDRDFVSYVGLGNKKHVKGVSLSSVASLPKKFYPLINSVDAKFSNVTEFHAQFCGKGTLDPMKVKGKIVICQVGETEGVDKGYQASLAGAAGVIVANDIEKGDEIYPELHFIPASDITNTDAQIVQKYLKSTKTPIAHLTSVKTLLSVKPAPIIATFSSRGPNPIDSTILKPDVTAPGVNILASYPTGIAPTFSAADRRRIPFNVISGTSMSCPHVAGIAGLVKSIHPNWSPAAIKSAIMTTAKTRGNNNQTILDSTKLKATPYAYGAGQVYPNDAADPGLVYDITINDYLNFLCARGYDAMKIKKFYAKPFNCVRSFKVTDLNYPSISVGELKIGAPLTINRRVKNVGSPGTYVARVKASPGVAVTIEPSTLVFRSVGEEKGFKVVLQNTGKVKSGDVFGTLIWSDGKHFVRSPIAVHLGPGIGN 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34404997 34408995 + MELO3C014075.2.1 Cme06g02719 331868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02719 706 Pfam Subtilase family 75 530 IPR000209 GO:0006508|GO:0008236
Cme06g02719 706 PRINTS Subtilisin serine protease family (S8) signature 148 161 IPR015500 -
Cme06g02719 706 PRINTS Subtilisin serine protease family (S8) signature 75 94 IPR015500 -
Cme06g02719 706 PRINTS Subtilisin serine protease family (S8) signature 487 503 IPR015500 -
Cme06g02719 706 SUPERFAMILY PA domain 333 412 IPR046450 -
Cme06g02719 706 ProSiteProfiles Serine proteases, subtilase domain profile. 51 557 - -
Cme06g02719 706 Pfam Fibronectin type-III domain 602 698 IPR041469 -
Cme06g02719 706 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 47 IPR037045 -
Cme06g02719 706 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 701 IPR045051 -
Cme06g02719 706 Gene3D - 282 426 - -
Cme06g02719 706 Pfam Peptidase inhibitor I9 3 47 IPR010259 -
Cme06g02719 706 Gene3D Peptidase S8/S53 domain 77 570 IPR036852 GO:0004252|GO:0006508
Cme06g02719 706 Pfam PA domain 330 403 IPR003137 -
Cme06g02719 706 CDD Peptidases_S8_3 45 523 IPR034197 -
Cme06g02719 706 CDD PA_subtilisin_like 288 417 - -
Cme06g02719 706 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1 701 - -
Cme06g02719 706 SUPERFAMILY Subtilisin-like 46 561 IPR036852 GO:0004252|GO:0006508
Cme06g02719 706 ProSitePatterns Serine proteases, subtilase family, serine active site. 488 498 IPR023828 -
Cme06g02719 706 Gene3D - 574 700 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02719 Cme-Chr6:34404997 Cme06g02725 Cme-Chr6:34449723 0 dispersed
Cme06g02716 Cme-Chr6:34362140 Cme06g02719 Cme-Chr6:34404997 0 proximal
Cme06g02719 Cme-Chr6:34404997 Cme06g02720 Cme-Chr6:34411012 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02719 - - cmo:103491001 1418.68