Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02720 ATTGCTAATCTTTTGCAGTCCTACATTGTTTACTTGGGATCACATTCACACGGCTCGAATCCTTCGGCGGCCGATCTCGAAATCGCAACAGAATCTCACTATAGTTTGCTTGGGTCACTGTTAGGAAGCAATGAAGCAGCTAAGGAAGCAATTTTCTATTCCTACAACCGACATATCAATGGCTTTGCAGCCATTCTTGACCAGAAAGTTGTAGAAGATTTAGCAAGGAATCCTGCTGTGGCATCTATCCATGAGAACAAGGGAAGAAAACTGCACACAACAAGTTCATGGAAATTTCTTGGAGTAGAGCATGATGATGGAATTCCTCATAACTCCATTTGGAATCGTGCAAGTTTTGGTGAATCTACAATCATTGGCAACCTTGACACAGGCGTTTGGCCAGAATCAAAGAGTTTCAATGATGAAGGATATGGACCTGTTCCCACAAGGTGGAAGGGAAGTTGTGAGGGTGGATCCAAATTTCATTGCAACAGGAAGCTAATTGGAGCAAGATATTTCAACAAAGGCTATGCAGCTTATGCAGGATCTCTCAATGCAAGCTATGAAACAGCAAGAGACAATGAAGGCCATGGAACACACACTTTATCCACAGCTGGAGGCAATTTCATTTCAGGAGCTAATGTATTTGGGAATGGCAATGGCACTGCAAAAGGAGGGTCCCCTAAAGCCCTTGTTGCTGCATATAAAGTATGTTGGCCTCAAGTGGATTCTGGTGGTGGTTGTTTTGATGCTGATATTCTAGCAGCCATTGAAGCTGCTATTAGTGATGGAGTTGATATTCTCTCACTTTCACTTGGTGGAGGTGCCAAAGATTTTTCCGAGGATGTAACGGCTATCGGGGCCTTCCATGCCGTTCAACAAGGTATCATCGTCGTTTGTTCTGCAGGTAACTCTGGACCAGCTCCAGGGACAATTGAAAATGGGGCACCTTGGATCTTAACTGTGGGTGCTAGCACAATCAATAGAGACTTTACAAGTTATGTTGCGCTAGGAAACAAGAAACATATTAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAGAACAGAAATTTTATCCACTGATCAATGCTGCAGATGCGAAAGCCAACAATGTTTCATCCGATGTTGCTCAACTATGTCAGGCGGGCTCTCTTGATCCCAAAAAGGTAAAAGGGAAGATTATACTTTGCCTTAGAGGGGAAAATGCAAGAGTAGACAAAGGTTATGCGGCAGCTCAAGCAGGTGCTGTTGGAATGATTCTTGCTAACGCTGAGCAAAATGGGGATGAACTTATAGCTGATGCTCACCTACTTCCTGTTTCTCATGTAAGCTATACCGATGGCCAATCAATCTACCAATACATCAATTTCACCAAAACTCCAATGGCTTACATGACTCATGTAAGAACAGAGTTAGGAATCAAACCAGCACCAGTTATGGCTTCATTCTCATCAAGAGGTCCTAATACAATTGAGGAGTCAATACTCAAGCCTGATATAACAGCACCTGGTGTCAATATCCTAGCAGCCTACTCTGAAGATGCATCCCCAAGTGGTTCGTTGTTTGATAATCGTCGAATTCCATTTAATATAGTATCTGGAACTTCCATGTCATGCCCCCATATTTCTGGTATTGTTGGCCTTCTCAAGACCCTTTATCCAACTTGGAGCCCAGCAGCTATCAAATCAGCAATCATGACCACAGCTGAAACCAGAGCCAATGACTTGCATCCAATACTAAACACAGTCAACCTTAAAGCCAACCCATTTGCATATGGTGCAGGACATGTCCAACCCAACAGAGCAATGAACCCTGGCCTTGTTTATGACCTTACCACCAACGACTACATGAATTTCTTGTGTGCTCAAGGCTACAACAAATCCCAAATCAGTAAATTCTCAGCTACGTCGTTCGTTTGTTCAAAGTCGTTCAAACTAACAGATTTCAACTACCCATCAATCTCCATACCTGACATGAAATCTGGGGTTGTGACAATCAACAGAAGAGTTAAGAATGTGGGAAAGCCAAGCACTTATGTTGCTAGAGTGAAAGTACCCCAAGGAGTATCAGTTTCGGTTGAGCCAAGAACATTGAAGTTTACTGGGATTGATGAAGAGAAAAGTTTCAAAGTTGTAATTGGGAGTGTTGCAAATAATAAGCATAGAGGGTATGTATTTGGATCTTTAATATGGGAAGATGGGAAGCATCATGTGAGAAGCCCAATTGTAGTGAATTTGGGATCTTATATTGTTTATTTGGGATCACATTCACATGGGTTGAATCCTTCTTCAATTGATGCTCAAATTGCAACAGAATCTCACTATAATTTGCTTGGATCCTTGTTGGGAAGATATTTACACTCTGTTTGTTGTGTTTCTAAGTACAGCAATGAAGAAGCTAAGGAAGCAATTTTCTACTCATACAATCGACACATCAATGGCTTTGCAGCTGTGGTAGATCAGAAAGTTGCTGAAGATTTAGCAAAACACCCTGATGTGGTATCAGTACTTGAAAACAAAGGAAGAAAACTTCACACAACAAATTCATGGAGCTTTCTTGGAGTTGAGAGTAATGGTGTAATTCCTTCAAACTCCATTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGGCAATCTTGACACAGGTGTTTGGCCAGAAGCAAAGAGCTTCGATGATAAAGAATATGGACCTATCCCATCAAGGTGGAAGGGAAGTTGTGAAGGTGGCTCCAACTTTCAGTGCAACAGGAAGCTAATTGGAGCAAGGTATTACAACAAAGGATATGCAGAAATTGCAGGACCTCTAAACTCAAGCTATGAATCTGCAAGGGACCATGAAGGCCATGGAACACACACATTATCAACAGCAGGAGGCAATTTTGTTCCAAATGCCAATTTATTTGGGTATGGTAATGGCACTGCAAAAGGAGGTTCCCCTAAAGCCCTTGTTGCTGCCTATAAAGTTTGTTGGCCAAAACTGTGGTTGTTTGGTGAGTGCTTTGACGCAGACATTCTTGCTGGCTTTGAAGCTGCCATTGCTGATGGAGTTGATGTTCTATCTGTTTCACTTGGTGGAGATCCATCTGATTTTGGCCAAGATTCAATAGCTATAGGATCATTTCATGCAGTTCAAAATGGTATTACTGTTGTTTGTTCTGCTGGAAACTCTGGCCCAGCTCCTGGAACTGTTTCTAATGTTGCACCCTGGATTATAACTGTGGGAGCTAGCACTGCTGACCGGCTTTATACGAATTATGTTGCAATCGGAGACAAGAGGCACTTCAAGGGTGCAAGTCTTTCTGAAAAAGGATTGCCAGTTCAGAAGTTCTATCCATTGATCAACTCTGTAGATGCAAAAGTCCAAAATTTCTCAAACAAATACGCGCAACTATGTGAAATAGAGTCTCTTGATCCTGAAAAGGTAAAAGGGAAGATTGTAGTTTGCCTTAGAGGAGACAATGCAAGAACGGAAAAAGGTTATGTGGTTGCTAAAGCAGGTGGTGTTGGAATGATTCTTGCTAATGCTGAGGAAAATGGGGATGACATTTCGGCTGATGCACATTTGCTTCCTGCTTCTCATATTACCTATTCTGATGGTCAATTAGTCTACCAATACATCAACTCTACCAAAATTCCAATGGCTTACCTGACGCACCCAAGAACAGAGTCAGGAGTCAAACCAGCACCGATTATGGCTTCATTCTCGTCAAGGGGTCCCAACTCAATCGATCCATCAATACTCAAGCCAGATATAACAGCACCAGGTGAGAATATATTAGCAGCTTATAGTGAAGATGGATCACCATCAGGGCTATATTTCGATAAACGTAGAGTGCCATTTAATGTTGAATCTGGGACTTCTATGTCATGCCCTCATGTTTCTGGAATTGTTGGTCTTCTCAAAACACTTTATCCTAAATGGAGTCCTGCTGCTATTAGATCTGCTATCATGACCACAGCTGGAACAAAAGCCAATGACTTGAATCCAATACTAAGCACAAAGCAAGAGAAAGCAAACGAATGGGCATATGGTGCAGGCCATGTTCGTCCAAACAAAGCAGCAGATCCAGGCCTTGTTTATGATCTTTCCACTGAAGACTATTTGAATTACTTATGTGCTCTAGGCTACAAGATAAAACAAATCAAACAATTCTCCAATGACACTTCATTCGTTTGTTCAAAATCATTCAAAATAACCGATCTCAACTACCCGTCGATCTCAATTCCAAATTTGGAGTCAGATGTTGCTTTGAAGATCAAAAGGAGACTGAAGAATGTGGGAAGTCCAGGCACATATGTTGTTCAAGTCAATGCGCCATTAGGGGTTTCGGTTTCGGTTGAGCCAACTAGTTTGAAGTTTACTGGAATTGATGAAGAGAAGAGTTTTCGAGTTGTGTTGAAAAGTAACGTGCCTAATGGTTTTCATCCAGAGTATGTGTTTGGGAAACTAGAATGGTCCGATGGGAATAACCATCGTGTTAGAAGTCCGATTGTAGTGAAATTAGGTAAATGA 4518 41.68 IANLLQSYIVYLGSHSHGSNPSAADLEIATESHYSLLGSLLGSNEAAKEAIFYSYNRHINGFAAILDQKVVEDLARNPAVASIHENKGRKLHTTSSWKFLGVEHDDGIPHNSIWNRASFGESTIIGNLDTGVWPESKSFNDEGYGPVPTRWKGSCEGGSKFHCNRKLIGARYFNKGYAAYAGSLNASYETARDNEGHGTHTLSTAGGNFISGANVFGNGNGTAKGGSPKALVAAYKVCWPQVDSGGGCFDADILAAIEAAISDGVDILSLSLGGGAKDFSEDVTAIGAFHAVQQGIIVVCSAGNSGPAPGTIENGAPWILTVGASTINRDFTSYVALGNKKHIKGASLSDKILPEQKFYPLINAADAKANNVSSDVAQLCQAGSLDPKKVKGKIILCLRGENARVDKGYAAAQAGAVGMILANAEQNGDELIADAHLLPVSHVSYTDGQSIYQYINFTKTPMAYMTHVRTELGIKPAPVMASFSSRGPNTIEESILKPDITAPGVNILAAYSEDASPSGSLFDNRRIPFNIVSGTSMSCPHISGIVGLLKTLYPTWSPAAIKSAIMTTAETRANDLHPILNTVNLKANPFAYGAGHVQPNRAMNPGLVYDLTTNDYMNFLCAQGYNKSQISKFSATSFVCSKSFKLTDFNYPSISIPDMKSGVVTINRRVKNVGKPSTYVARVKVPQGVSVSVEPRTLKFTGIDEEKSFKVVIGSVANNKHRGYVFGSLIWEDGKHHVRSPIVVNLGSYIVYLGSHSHGLNPSSIDAQIATESHYNLLGSLLGRYLHSVCCVSKYSNEEAKEAIFYSYNRHINGFAAVVDQKVAEDLAKHPDVVSVLENKGRKLHTTNSWSFLGVESNGVIPSNSIWNLASFGESTIIGNLDTGVWPEAKSFDDKEYGPIPSRWKGSCEGGSNFQCNRKLIGARYYNKGYAEIAGPLNSSYESARDHEGHGTHTLSTAGGNFVPNANLFGYGNGTAKGGSPKALVAAYKVCWPKLWLFGECFDADILAGFEAAIADGVDVLSVSLGGDPSDFGQDSIAIGSFHAVQNGITVVCSAGNSGPAPGTVSNVAPWIITVGASTADRLYTNYVAIGDKRHFKGASLSEKGLPVQKFYPLINSVDAKVQNFSNKYAQLCEIESLDPEKVKGKIVVCLRGDNARTEKGYVVAKAGGVGMILANAEENGDDISADAHLLPASHITYSDGQLVYQYINSTKIPMAYLTHPRTESGVKPAPIMASFSSRGPNSIDPSILKPDITAPGENILAAYSEDGSPSGLYFDKRRVPFNVESGTSMSCPHVSGIVGLLKTLYPKWSPAAIRSAIMTTAGTKANDLNPILSTKQEKANEWAYGAGHVRPNKAADPGLVYDLSTEDYLNYLCALGYKIKQIKQFSNDTSFVCSKSFKITDLNYPSISIPNLESDVALKIKRRLKNVGSPGTYVVQVNAPLGVSVSVEPTSLKFTGIDEEKSFRVVLKSNVPNGFHPEYVFGKLEWSDGNNHRVRSPIVVKLGK 1505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34411012 34424168 + MELO3C014076.2.1 Cme06g02720 331869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02720 1505 Pfam Peptidase inhibitor I9 7 92 IPR010259 -
Cme06g02720 1505 Pfam Peptidase inhibitor I9 748 845 IPR010259 -
Cme06g02720 1505 PRINTS Subtilisin serine protease family (S8) signature 120 139 IPR015500 -
Cme06g02720 1505 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Cme06g02720 1505 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Cme06g02720 1505 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Cme06g02720 1505 SUPERFAMILY PA domain 1136 1214 IPR046450 -
Cme06g02720 1505 Pfam PA domain 377 451 IPR003137 -
Cme06g02720 1505 Pfam PA domain 1133 1202 IPR003137 -
Cme06g02720 1505 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 746 845 IPR037045 -
Cme06g02720 1505 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 92 IPR037045 -
Cme06g02720 1505 ProSitePatterns Serine proteases, subtilase family, serine active site. 1287 1297 IPR023828 -
Cme06g02720 1505 Gene3D - 1373 1503 - -
Cme06g02720 1505 Gene3D - 620 745 - -
Cme06g02720 1505 CDD PA_subtilisin_like 334 463 - -
Cme06g02720 1505 ProSiteProfiles Serine proteases, subtilase domain profile. 96 603 - -
Cme06g02720 1505 SUPERFAMILY Subtilisin-like 91 607 IPR036852 GO:0004252|GO:0006508
Cme06g02720 1505 Gene3D Peptidase S8/S53 domain 876 1369 IPR036852 GO:0004252|GO:0006508
Cme06g02720 1505 Gene3D Peptidase S8/S53 domain 123 616 IPR036852 GO:0004252|GO:0006508
Cme06g02720 1505 CDD Peptidases_S8_3 843 1322 IPR034197 -
Cme06g02720 1505 Pfam Fibronectin type-III domain 648 744 IPR041469 -
Cme06g02720 1505 Pfam Fibronectin type-III domain 1402 1501 IPR041469 -
Cme06g02720 1505 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 6 748 - -
Cme06g02720 1505 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 748 1504 - -
Cme06g02720 1505 ProSiteProfiles Serine proteases, subtilase domain profile. 849 1356 - -
Cme06g02720 1505 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 748 IPR045051 -
Cme06g02720 1505 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 748 1504 IPR045051 -
Cme06g02720 1505 SUPERFAMILY Subtilisin-like 844 1360 IPR036852 GO:0004252|GO:0006508
Cme06g02720 1505 CDD Peptidases_S8_3 90 569 IPR034197 -
Cme06g02720 1505 Pfam Subtilase family 121 595 IPR000209 GO:0006508|GO:0008236
Cme06g02720 1505 Pfam Subtilase family 874 1334 IPR000209 GO:0006508|GO:0008236
Cme06g02720 1505 SUPERFAMILY PA domain 385 456 IPR046450 -
Cme06g02720 1505 CDD PA_subtilisin_like 1087 1218 - -
Cme06g02720 1505 Gene3D - 328 472 - -
Cme06g02720 1505 Gene3D - 1081 1225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00577 Cme-Chr1:4409737 Cme06g02720 Cme-Chr6:34411012 0 dispersed
Cme06g02716 Cme-Chr6:34362140 Cme06g02720 Cme-Chr6:34411012 0 dispersed
Cme06g02720 Cme-Chr6:34411012 Cme12g00800 Cme-Chr12:14495397 0 dispersed
Cme08g00188 Cme-Chr8:1286737 Cme06g02720 Cme-Chr6:34411012 0 dispersed
Cme06g02720 Cme-Chr6:34411012 Cme06g02725 Cme-Chr6:34449723 0 proximal
Cme06g02719 Cme-Chr6:34404997 Cme06g02720 Cme-Chr6:34411012 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02720 - - csv:101212014 1880.14