Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02725 ATGCTTGATGAAAGACAAGCAACAGATCTTGCAAAATTTCCACATGTCGTTTCGGTTTTCGAAAGTCGATCAAGAAAATTACATACAACACAATCATGGAAATTTCTTGGAGTAGAAAAACATGAAGAAATTCCAACTTCCAACTCCATTTGGAACGTTACGAGGTTTGGTGAAGATATAATCATAGCTAACTTCGACACAGGCGTTTGGCCAGAATCTAAAAGCTTTAGTGATGAAGGGTATGGACCTATTCCATCAAGGTGGATGGGAACTTGTCAAAGTGATGCCGACCCCAAGTTCCGTTGTAATAGAAAATTGATTGGAGCAAGATTCTTCAACATAGGCTATGGTGAACTTGCTGATACCTTCAATTCTTCAAGAGACAATGTAGGACATGGAACCCACACTTTGTCAATAGCTGGTGGCAATTTTGTCCCTGGAGCTAATGTTTTGGGATTGGGCAATGGTACGGTCAAAGGTGGCTCCCCTAGAGCCCGTGTTGCGTCCTATAAGGTTTGTTGGCCAGACGAAGCCAATGAGTGTATGGACCCAAATACCTTAGCTGCCTTTGAAGCTGCAATTGACGATGGCGTTGATGTTATCTCGATTTCTGTTGGTGGAGAGCCCAAAGAGTTCTTTAGTGATGCACTCTCTGTAGGAGCATTCCATGCAGTTGAGCGAGGTATTGTTGTTGTTTCTTCCGCTGGGAACGTGGGACCAACTCCTGGGACTGTATCAAATGTATCGCCATGGATCCTAACTGTTGGAGCTAGTACTACTGATAGAGGTTTCACCAATTTTGTGATCCTGGGAAATAAGAAGAAATTCAAGGGAACAAGCTTTTCTTCTAAGGTGCTGCCAGTTAACAAGTTCTACCCTTTAATCAATGCTGTGGATGCAAAAGCCAAAAATGTCTCCGTTAGTGATGCAGAAGTTTGTGACGAGGGCTCACTTGATCCCAAAAAGTTAGCAGGGAAGATTGTGGTTTGCCTTCGAGGAGGTCTTTCAAGAGTATCTAAGGGCTATGTAGCTGCCAAGGCAGGGGCTGTTGGAATGATCGTGGAAAACGATGAGGATAGTGGGAATGCAATTATAACTGATTCACATGTCCTACCAGCTTCTCATGTAACCTACGATGACAGCATATCTATCTTCCAATACATCAATTCTACCAAGAGACCAAAGGCCTACATCAGTTCTGTGATGACAGAACTGGAAATCACACCATCCGCAGTAGTGGCTGATTTCTCATCAAGAGGCCCCAATACAATAGAGGAGTCGATCCTTAAGCCTGATATAACAGCACCAGGTGTGAATATACTGGCGGCTTACCCCGACGGCATACCATTGACAGAAGCACCATTGGACGATCGTCAATCTCCTTTTAAAGTAGATTCTGGCACATCCATGGCCTGCCCCCATGTTGCTGGCATTGTAGGCCTTCTCAAAACCCTAAACCCCAAATGGAGTCCAGCGGCCATTAAATCTGCAATCATGACAACAGACAACAATTTCAATCCAATAGTAGACCACAGAGGACTCGAAGCAAACCCATTAGCATATGGTGCCGGACATGTAAATCCAAACAGTGCAATGGACCCTGGGCTAGTTTACGACATTACAATCGACGATTACCTCAATTTCTTATGTGCTAGAGGCTACAATACAAAACAAATCAAAAGAATATCAAAGAAGAACTTTATTTGTGATAAATCATTCAAAGTGACGGATTTGAATTACCCATCGATCTCAGTTACAAATCTGAAAATGGGTCCTGTGGCGATCAATAGAAAATTGAAGAATGTGGGAAGTCCAGGGAGGTATGTTGCTAGAGTGAAGACGCCATTGGAAGTTTCAATCATTGTTGAGCCAAGAATATTGGAATTTACAGCTATGGATGAAGAGAAAAGCTTCAAGGTGTTGTTAAAAAGAAGTGGAAAGGGAAAGCAAGAAGGTTATGTGTTTGGGGAATTAGTATGGACTGATTTCAATCACCATGTTAGGAGCTCAATTGTTGTGAATTTAGGAGAATGA 2034 42.67 MLDERQATDLAKFPHVVSVFESRSRKLHTTQSWKFLGVEKHEEIPTSNSIWNVTRFGEDIIIANFDTGVWPESKSFSDEGYGPIPSRWMGTCQSDADPKFRCNRKLIGARFFNIGYGELADTFNSSRDNVGHGTHTLSIAGGNFVPGANVLGLGNGTVKGGSPRARVASYKVCWPDEANECMDPNTLAAFEAAIDDGVDVISISVGGEPKEFFSDALSVGAFHAVERGIVVVSSAGNVGPTPGTVSNVSPWILTVGASTTDRGFTNFVILGNKKKFKGTSFSSKVLPVNKFYPLINAVDAKAKNVSVSDAEVCDEGSLDPKKLAGKIVVCLRGGLSRVSKGYVAAKAGAVGMIVENDEDSGNAIITDSHVLPASHVTYDDSISIFQYINSTKRPKAYISSVMTELEITPSAVVADFSSRGPNTIEESILKPDITAPGVNILAAYPDGIPLTEAPLDDRQSPFKVDSGTSMACPHVAGIVGLLKTLNPKWSPAAIKSAIMTTDNNFNPIVDHRGLEANPLAYGAGHVNPNSAMDPGLVYDITIDDYLNFLCARGYNTKQIKRISKKNFICDKSFKVTDLNYPSISVTNLKMGPVAINRKLKNVGSPGRYVARVKTPLEVSIIVEPRILEFTAMDEEKSFKVLLKRSGKGKQEGYVFGELVWTDFNHHVRSSIVVNLGE 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34449723 34453285 - MELO3C014082.2.1 Cme06g02725 331874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02725 677 Gene3D - 261 405 - -
Cme06g02725 677 CDD Peptidases_S8_3 26 501 IPR034197 -
Cme06g02725 677 Gene3D - 549 675 - -
Cme06g02725 677 ProSiteProfiles Serine proteases, subtilase domain profile. 32 532 - -
Cme06g02725 677 SUPERFAMILY Subtilisin-like 27 536 IPR036852 GO:0004252|GO:0006508
Cme06g02725 677 CDD PA_subtilisin_like 268 398 - -
Cme06g02725 677 Pfam Subtilase family 57 510 IPR000209 GO:0006508|GO:0008236
Cme06g02725 677 Gene3D Peptidase S8/S53 domain 59 545 IPR036852 GO:0004252|GO:0006508
Cme06g02725 677 ProSitePatterns Serine proteases, subtilase family, serine active site. 467 477 IPR023828 -
Cme06g02725 677 SUPERFAMILY PA domain 299 385 IPR046450 -
Cme06g02725 677 Pfam PA domain 312 380 IPR003137 -
Cme06g02725 677 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 677 IPR045051 -
Cme06g02725 677 PRINTS Subtilisin serine protease family (S8) signature 57 76 IPR015500 -
Cme06g02725 677 PRINTS Subtilisin serine protease family (S8) signature 466 482 IPR015500 -
Cme06g02725 677 PRINTS Subtilisin serine protease family (S8) signature 128 141 IPR015500 -
Cme06g02725 677 Pfam Fibronectin type-III domain 577 673 IPR041469 -
Cme06g02725 677 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 2 677 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02719 Cme-Chr6:34404997 Cme06g02725 Cme-Chr6:34449723 0 dispersed
Cme06g02725 Cme-Chr6:34449723 Cme12g00800 Cme-Chr12:14495397 0 dispersed
Cme06g02720 Cme-Chr6:34411012 Cme06g02725 Cme-Chr6:34449723 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02725 - - cmo:103491006 1328.54