Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme06g02732 | CAAATAAATTTTCAAAATTGCAGGAGTGAGTTGAAGAATGCAGTTATCGAAGGAGGAGGTACTACTTTCACGAGGGCTTATGGGGGAATTCATGCCTTTGAATACCTTGGGAAGGATTCAAGATTTAACCAAGTTTTTAACATTGCAATGATAAATCATTCCACTATGCCCATCAAGAAAATTCTCAAAGCCTATAAAGGCTTTGCAAACATCAAGCAACTAGTTGATGTAGGTGGTGGCCTTGGGATCACCCTTCAACTCATCACTTCTATGTATCCTTATATCAAAGGCATCAACTACGACTTACCTCATGTAATTCGTGATGCCCCTCCCTATCCAGGTGTGGAACATGTGGGAGGAGACATGTTTGAGAAAATTCCAAATGGAGATGCTGTTTTCATGAAGTGGATACTACATGATTGGAGTGACGAACATTGCATAACGTTGTTGAAAAATTGCTACAATGCAATTCCTGATGATGGAAAGGTAATCGTAGTGGACTCAATACTTCCAACATTACCGGAGACCACAAGTGCAACAAAAGCTGTTGCCCAATGTGATATGGTTGAGATGACTCTGTATGAAGGAGGCAAAGAAAGAACTAGAGATGAATTCAAGGCCCTTGCAACCAAAGCTGGCTTTAAACATGTCATATTTCAATGTCTTGTGGCTAATCTTTGGGTTACTGAGTTTCTTAAAATTTGA | 705 | 39.72 | QINFQNCRSELKNAVIEGGGTTFTRAYGGIHAFEYLGKDSRFNQVFNIAMINHSTMPIKKILKAYKGFANIKQLVDVGGGLGITLQLITSMYPYIKGINYDLPHVIRDAPPYPGVEHVGGDMFEKIPNGDAVFMKWILHDWSDEHCITLLKNCYNAIPDDGKVIVVDSILPTLPETTSATKAVAQCDMVEMTLYEGGKERTRDEFKALATKAGFKHVIFQCLVANLWVTEFLKI | 234 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 34544609 | 34546350 | - | MELO3C027330.2.1 | Cme06g02732 | 331881 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme06g02732 | 234 | Pfam | O-methyltransferase domain | 10 | 215 | IPR001077 | GO:0008171 | |
| Cme06g02732 | 234 | PANTHER | CAFFEIC ACID O-METHYLTRANSFERASE | 4 | 233 | - | - | |
| Cme06g02732 | 234 | Gene3D | Vaccinia Virus protein VP39 | 3 | 233 | IPR029063 | - | |
| Cme06g02732 | 234 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 233 | IPR016461 | GO:0008168 | |
| Cme06g02732 | 234 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 8 | 229 | IPR029063 | - | |
| Cme06g02732 | 234 | PANTHER | O-METHYLTRANSFERASE | 4 | 233 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme06g02732 | Cme-Chr6:34544609 | Cme06g02739 | Cme-Chr6:34618827 | 1.51E-125 | dispersed | |
| Cme06g02732 | Cme-Chr6:34544609 | Cme06g02738 | Cme-Chr6:34593902 | 9.63E-90 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme06g02732 | K13066 | - | csv:101214675 | 436.417 |