Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02738 ATGGCTTCCACGACAGAGGAAACAACCATCACTTCCTTCGACAACCACGACGTCGTGGAACAACAGCACTATGCTTACGCTATGGAACTGGCTACCTTATCGGCAATGCCAATGACACTCCAAACAGCCTTTGAACTCGGCGTGTTTGAGATCTTATCTAAGGCTGGAAATGGGGCCGAGCTCTCTTCGACAGAGATAACGGCTAATATAACCACAACAAACCCCGAAGCGTCATTGATGATTGATCGGATGTTGAGGCTTTTGGCAAGCCATGCTATCATGGGATGCTCTTTGGCTTCTGATGAAGATGGGAATGTGAAAAGACTTTATAGCCTTACGTCAGTTTCTAAGTATTATGTTCGTAACGAAGATGGTGTCTCTTTAGATCCACTTCTAACACTACTCCAGGATAAAGTCCTTCTGCATACATGGAGTGAGTTGAAGAATGCAGTTATTGAAGGGGGAGGTACTACTTTCACGAGGGCTTATGGGGGAATTCATGCCTTTGAATACCTTGGCAAGGATTCAAGATTTAACCAAGTTTTTAACATTGCAATGATGAATCATTCCACTATGCCCATCAAGAAAATTCTCAAAGTCTACAAAGGCTTTGCAAAGATCAAGCAACTAGTTGATGTAGGTGGTGGCCTTGGGATCACCCTTCAACTCATCACTTCTATGTACCCTTACATCAAAGGTATCAACTATGACTTACCTCACGTCATTCGCGATGCCCCTCCTTATCCAGGTGTGGAACATGTGGGAGGAGACATGTTTGAGAAAATTCCAAATGGAGATGCTGTTTTTATGAAGGTTGAAACATTATATTTTGTTTCATAA 840 42.86 MASTTEETTITSFDNHDVVEQQHYAYAMELATLSAMPMTLQTAFELGVFEILSKAGNGAELSSTEITANITTTNPEASLMIDRMLRLLASHAIMGCSLASDEDGNVKRLYSLTSVSKYYVRNEDGVSLDPLLTLLQDKVLLHTWSELKNAVIEGGGTTFTRAYGGIHAFEYLGKDSRFNQVFNIAMMNHSTMPIKKILKVYKGFAKIKQLVDVGGGLGITLQLITSMYPYIKGINYDLPHVIRDAPPYPGVEHVGGDMFEKIPNGDAVFMKVETLYFVS 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34593902 34600143 - MELO3C014089.2.1 Cme06g02738 331887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02738 279 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 271 IPR029063 -
Cme06g02738 279 Pfam O-methyltransferase domain 144 271 IPR001077 GO:0008171
Cme06g02738 279 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 22 272 - -
Cme06g02738 279 Gene3D - 4 119 IPR036388 -
Cme06g02738 279 PANTHER O-METHYLTRANSFERASE 22 272 IPR016461 GO:0008168
Cme06g02738 279 SUPERFAMILY Winged helix DNA-binding domain 21 122 IPR036390 -
Cme06g02738 279 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 279 IPR016461 GO:0008168
Cme06g02738 279 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983
Cme06g02738 279 Gene3D Vaccinia Virus protein VP39 120 273 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02738 Cme-Chr6:34593902 Cme06g02748 Cme-Chr6:34734347 2.28E-125 dispersed
Cme06g02732 Cme-Chr6:34544609 Cme06g02738 Cme-Chr6:34593902 9.63E-90 proximal
Cme06g02733 Cme-Chr6:34547389 Cme06g02738 Cme-Chr6:34593902 1.53E-86 proximal
Cme06g02738 Cme-Chr6:34593902 Cme06g02739 Cme-Chr6:34618827 2.49E-143 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02738 K13066 - csv:101214675 476.863