Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme06g02739 | ATGGCTTCCTCCGACAACGACACCGCCGTTGAACAACAAAATTACGCTAATGCAGCAGAGCTCGTTACCTTATCAGTCCTACCAATGACACTCCAAGCAGTGTTTGAGCTCGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGACAGGGAGCTCTCTCCAGCAGAGATAACGGCTGAGATAACCACGACAAACCCCTATGCAGCGTCGATGATTGATCGGATGTTGAGGCTTTTGGCAAGCCACTCGGTGGTGGGATGCTCTATAGCGTCCGATGAAGATGGGAATGTGCAAAGGTTTTATAGCCTTACGCCAATTTCTAAATATTATGTTCGAAATGAAGATGGGGTCTCGTTGGGTCCTATTTTATCGTTGATTCAAGACAAAGTCTTTCTCCAAAGCTGGAGTGAGTTAAAGAATGCAGTTATCGAAGGAGGAGTTCCTTTCGACCGAGCTCATGGCGGAGTTCATGCATTTGAATACCCTAGTTTGGATCCAAGATTCAACCAAGTATTCAATATTGGAATGATAAATCACACTACAATGTCCATAAAAGAAATTGTCAAATCATACAAAGGTTTTGCAAACATCAAGCAATTAGTTGATGTTGGTGGTGGACTTGGGGTCACCCTTCAAATCATTACTTCTACCTATCCTTCTATCAAAGGCATCAATTTCGACCTACCTCATGTCATTCGTGACGCACCTTCTTATCATGGTGTAGAACATGTGGGAGGAGACATGTTTGAGAATGTTCCAAATGGAGATGCCATTTTCATGAAGTGGATCCTACATGATTGGAGTGACGATCATTGTCTAAAGTTGTTGAAAAATTGCTACAATGCAATTCCGGATGATGGAAAGGTAATCATAGTAGAGTGTGTGTTTCCAACTGAACCTGAAACCACAACCGTAACAAAATCAATAGCCCAAGGTGATGTGCTGATGATGACTCAAAATCCAGGAGGAAAGGAAAGAACTAGAGATGAATTTAAGACCCTAGCAACCAAAGCTGGGTTTAAACATCTCATATTCCAATGTTTTGTATCTAATCTTTGGGTTATAGAGTTTCTTAAAAATTAA | 1080 | 41.85 | MASSDNDTAVEQQNYANAAELVTLSVLPMTLQAVFELGVFEILAKAGDRELSPAEITAEITTTNPYAASMIDRMLRLLASHSVVGCSIASDEDGNVQRFYSLTPISKYYVRNEDGVSLGPILSLIQDKVFLQSWSELKNAVIEGGVPFDRAHGGVHAFEYPSLDPRFNQVFNIGMINHTTMSIKEIVKSYKGFANIKQLVDVGGGLGVTLQIITSTYPSIKGINFDLPHVIRDAPSYHGVEHVGGDMFENVPNGDAIFMKWILHDWSDDHCLKLLKNCYNAIPDDGKVIIVECVFPTEPETTTVTKSIAQGDVLMMTQNPGGKERTRDEFKTLATKAGFKHLIFQCFVSNLWVIEFLKN | 359 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 34618827 | 34623108 | - | MELO3C014091.2.1 | Cme06g02739 | 331888 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme06g02739 | 359 | Gene3D | - | 1 | 109 | IPR036388 | - | |
| Cme06g02739 | 359 | Pfam | O-methyltransferase domain | 134 | 340 | IPR001077 | GO:0008171 | |
| Cme06g02739 | 359 | PIRSF | O-mtase | 1 | 358 | IPR016461 | GO:0008168 | |
| Cme06g02739 | 359 | PANTHER | O-METHYLTRANSFERASE | 15 | 358 | IPR016461 | GO:0008168 | |
| Cme06g02739 | 359 | Pfam | Dimerisation domain | 29 | 79 | IPR012967 | GO:0046983 | |
| Cme06g02739 | 359 | PANTHER | CAFFEIC ACID O-METHYLTRANSFERASE | 15 | 358 | - | - | |
| Cme06g02739 | 359 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 115 | 356 | IPR029063 | - | |
| Cme06g02739 | 359 | Gene3D | Vaccinia Virus protein VP39 | 110 | 358 | IPR029063 | - | |
| Cme06g02739 | 359 | SUPERFAMILY | Winged helix DNA-binding domain | 12 | 112 | IPR036390 | - | |
| Cme06g02739 | 359 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 19 | 358 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme06g02732 | Cme-Chr6:34544609 | Cme06g02739 | Cme-Chr6:34618827 | 1.51E-125 | dispersed | |
| Cme06g02733 | Cme-Chr6:34547389 | Cme06g02739 | Cme-Chr6:34618827 | 8.17E-62 | dispersed | |
| Cme06g02739 | Cme-Chr6:34618827 | Cme06g02748 | Cme-Chr6:34734347 | 0 | dispersed | |
| Cme06g02739 | Cme-Chr6:34618827 | Cme06g02743 | Cme-Chr6:34683514 | 4.52E-32 | proximal | |
| Cme06g02738 | Cme-Chr6:34593902 | Cme06g02739 | Cme-Chr6:34618827 | 2.49E-143 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme06g02739 | K13066 | - | csv:101214916 | 622.468 |