Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02769 ATGACTCAAAAAATTATCCTTCTTTTCACCCTTTTTCTCCTTATCTTCACTACCCCAAGAACAGAGTGTATCGGCTTCGATTTTACTTCTTTCAATATCAGAAATCTGACTCTCCTTGGCGACTCTCATCTCCGAGATGGCGTCATTGGCCTCACTAAAGAGCTCGGAGTTCCTTCTTCAAGCGCCGGCACCGTAATTTACAACAAACCCATCGGATTTTACGACGCCGATGCTAACTTTACTGCTTCTTTCTCTACAAGATTCTCTTTCTCCATCACCAACATCAACCCCACTTCCTCCGGCGACGGTCTTTCCTTTTTCCTCTCCCCCGATAATCAGACTCTCGGCAGTCCAGGCGGGTATTTGGGTCTCGTCAATTCTTCCCAATTGACCAAGAACAAGTTTCTCGCGGTTGAATTTGATACACGGCTTGATTCTGTCTTCAAGGATCCGAATGCCCATCATGTTGGCTTCGACATTGAGAGCCTGATTTCGATCAAGACTGCTAATCCTGCTAGTGAAGGTATTAATCTCAAGAGTGGGAAGTCGATTACGGCTTGGATTGAGTACAAGAATGAGGAATGTAGGTTGAGGGTTTTCTTGAGTAATTCTAGTTCGAAACCTTCTAAGGCGCTTCTTGACGTCGGTGTCGATCTTTCGAGCTATCTTAAGGAGGCTATGTTTGTTGGGTTTTCGGGGTCGACCGAAGGGAGTACTGAGCTTCATTTGATTGAGAATTGGAGTTTTAATACTTCTGGGTTTGTTCCTGCTAGGCCTAGATTTAACCCTCATAATGTTTCTGATAGCTCTGTGATTGTTTCTCCTAATATTTCTTTATCTGATTCTGGCAACGGTCGTCACAGTAGGCTCGGATTAGGTCTCGGGATCGCCGGACCGGCTTTCTTTTGTGCTGTGATTGCTGTTTTTGGTTTCTTTTCACTTAGGAAATGGAGGAGGATTAGGACTCAGAAAAGCATCAAGGCAGAACTTTTGACAGGTCCTAGAGAGTTTAGTTACAAAGAACTAAAGACAGCCACAAAAGGATTTCATTCAAGTAGGATCATTGGCAATGGGGCTTTTGGGACTGTCTATAAAGCTTTTTGCATCTCATCCGGAAACATTTCTGCGGTTAAAAGATCAAAGCATTCCCACGAGGGGAAGACCGAGTTCCTAGCCGAGTTGTCGATCATAGCCCGGTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGTGTTGAGAAAGGTGAACTGCTTCTTGTTTACGACTTTATGCCGAACGGGAGCCTCGATAAGCTGCTTTACCAGGAATCTAGTGAAGCCAGCTTGTTAAACTGGTCTCACAGGTACAATATTGCTGTTGGATTGGCGTCTGTGCTGACATATCTACATCAGGAGTGTGAACAGCAAGTCATCCACAGAGATATAAAGACGGGTAACGTACTACTCGATGGGAACTTCAATGCGAGATTGGGCGACTTTGGATTGGCAAAGCTCATGGATCATGACAAGAGCCCGGTTTCAACTCTAACGGCAGGAACAATGGGATATCTTGCACCTGAATATCTTCAATATGGGAAAGCAACTGAGAAGACCGACGTTTTCAGCTACGGTGTGGTTATCCTTGAAGTAGCATGTGGGAGGAGGCCGATTGAAAGAGAACCAGGTACTCAAAAAATGGTCAACCTGGTAGATTGGGTTTGGGGATTGCATTCTCAAGGCAAGATCATTGAAGCAGCTGATAACAGGTTGAATGGGGAGTTCAAGGAAGAAGAAATGAAGAAGCTGTTACTCGTTGGATTGAGCTGTGCAAACCCGGATAGCTCGACAAGACCTTCAATGAGGAAGGTCCTACAGATTCTCAACAATGAGGCAGAGCCAGCGTTGGTGCCTAAAATGAAGCCTAGTCTTACATTTTCTTGTGGCTTTTCACTGACCGTGGATGACATTATAATAGAGGAAGAAGGTGGAGGAGAGTGGGAAACTTCAAGGCCAACCATTGTCCAAATAGACTGA 2016 44.99 MTQKIILLFTLFLLIFTTPRTECIGFDFTSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGTVIYNKPIGFYDADANFTASFSTRFSFSITNINPTSSGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFLAVEFDTRLDSVFKDPNAHHVGFDIESLISIKTANPASEGINLKSGKSITAWIEYKNEECRLRVFLSNSSSKPSKALLDVGVDLSSYLKEAMFVGFSGSTEGSTELHLIENWSFNTSGFVPARPRFNPHNVSDSSVIVSPNISLSDSGNGRHSRLGLGLGIAGPAFFCAVIAVFGFFSLRKWRRIRTQKSIKAELLTGPREFSYKELKTATKGFHSSRIIGNGAFGTVYKAFCISSGNISAVKRSKHSHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKLLYQESSEASLLNWSHRYNIAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIEREPGTQKMVNLVDWVWGLHSQGKIIEAADNRLNGEFKEEEMKKLLLVGLSCANPDSSTRPSMRKVLQILNNEAEPALVPKMKPSLTFSCGFSLTVDDIIIEEEGGGEWETSRPTIVQID 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 34941554 34943764 - MELO3C014117.2.1 Cme06g02769 331918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02769 671 SMART serkin_6 349 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02769 671 Pfam Legume lectin domain 25 256 IPR001220 GO:0030246
Cme06g02769 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Cme06g02769 671 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Cme06g02769 671 Pfam Protein kinase domain 349 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02769 671 PANTHER - 21 641 - -
Cme06g02769 671 ProSiteProfiles Protein kinase domain profile. 349 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02769 671 Gene3D Transferase(Phosphotransferase) domain 1 425 641 - -
Cme06g02769 671 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 21 641 - -
Cme06g02769 671 Gene3D Phosphorylase Kinase; domain 1 313 424 - -
Cme06g02769 671 CDD lectin_legume_LecRK_Arcelin_ConA 26 253 IPR001220 GO:0030246
Cme06g02769 671 SUPERFAMILY Protein kinase-like (PK-like) 332 643 IPR011009 -
Cme06g02769 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Cme06g02769 671 CDD STKc_IRAK 355 623 - -
Cme06g02769 671 Gene3D - 22 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01902 Cme-Chr1:27405838 Cme06g02769 Cme-Chr6:34941554 2.59E-138 dispersed
Cme03g00384 Cme-Chr3:5333686 Cme06g02769 Cme-Chr6:34941554 3.71E-143 dispersed
Cme04g02542 Cme-Chr4:31637313 Cme06g02769 Cme-Chr6:34941554 0 dispersed
Cme06g02769 Cme-Chr6:34941554 Cme04g02645 Cme-Chr4:32188876 1.36E-134 dispersed
Cme06g02769 Cme-Chr6:34941554 Cme04g02643 Cme-Chr4:32182873 2.76E-124 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64985 PF00069 Pkinase 2.10E-51 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02769 - - csv:101209797 1275.38