Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02786 ATGAAGGAACCTTCACGAAAGAAAGTTCCAAATCAATCTTATGGGTTCTATGAACAACCACAGCAAGAACCCGGGTCCTGTTACTGGCCTCCTATCAACCATGTAGATGGTCTGTATTCAGACGATGCATTCGATCAAAATCACTTACCCTCTGAGGCTTTCAAACAGTATTGCAACCTTGAGTCGTCCTCAGGAACTAATAGTTACCCTCATCAAAATTCGTCCTCTACTGCTAGCTTCACATCAAATGGTAGCCCTTCCTCACATCAAGAGTGCCATTCATACCCTATAGACCTGTATCATTCTCCTGACAATAACTGTGGCTCACCTATCAGTAGATCTTGTTTAACGGATGATGCTGCTGATGACTTAAGGCACAAGATCAGGGAATTGGAAACTGCAATGCTTGGACCTGATGCAGATGGGCTTGACGTCTATTCTATCACTGAACCAATTCATCCTCTATTACCCGTGCAAGATGCAGGTTGGAAGGATGTGGCTGACATAATCTCTAGAAGGGATTTGAAAGAGATGCTTTGTGCTTGTGCACGAGCAATAGATGAGAATGATATGTTGACTGGAGAATGGTTGGTATCAGAGTTACGAGGAATGGTCTCAGTTTCTGGTGAGCCGATCCAACGATTAGGGGCTTACTTGTTAGAGGCACTTGTTGCAAGGACAGCATCTTCAGGTAGTTCTATCTACAAAGCCCTAAAATGTAAAGAGCCTATAGGTGCTGAACTGCTCTCATACATGCATGTTCTATATGAAATTTGCCCTTATTTCAAGTTTGGGTACCTTTCAGCAAATGGGGCAATTGCTGAAGCTATAAAAGGTGAAAATAGAGTTCACATAATTGATTTTCAGATAGCTCAGGGGAATCAATGGATCACGTTGATGCAAGCTCTCGCCAATCGGCCTGGAGGACCCCCAAAGGTTACTATTACAGGCATAGATGATTCCACTTCAGCTTTCGCTCGAGGAGGGGGACTTGAGATTGTCAGAAAAAGGTTGTTGATTTTAGCAGAGTCATTAAAGATACCCTTTGAGTTCCATGGAATTGCAGGCTCTGCTTCTGAGATTCAACGTGAAGATCTTAAAGTTCAACCTGGTGAAGCGATTGCTGTGAGTTTTTCCTTGGTGCTGCACCATATGCCAGATGAAAGTGTTGGCAGTCAGAATCACCGGGATCGAATTCTGCAGCTGGTCAAGAGCTTGTCTCCAAAAGTCGTGACGGTTGTCGAGCTCGAGTCAAACAACAATACAGCACCCTTTTTATCTCGTTTCCTCCAGACATTAAAGTATTATACTGCTGTTTTTGAATCCATAGATGTGACACTCCCAAGAGATCACAAGGAGCGAATCAACGTGGAGCAACACTGTTTAGCTCGAGACATCGTAAATTTAGTAGCATGTGAGGGAACTGAAAGAATCGAACGACATGAACTTTTCAGGAAGTGGAGATCACGGTTATTCATGGCTGGGTTTAAGCCACACCCTTTAAGTCCTTTTGTCAATGCTACTATTGAGGCACTGCTAAAGAACTACTGTGACAAGTATACACTTGAAGAAAGGGATGGAGTTCTGTATCTTGGGTGGTTGAACCAAAATTTGGTTACCTCTAGTGCTTGGATTTGA 1638 43.28 MKEPSRKKVPNQSYGFYEQPQQEPGSCYWPPINHVDGLYSDDAFDQNHLPSEAFKQYCNLESSSGTNSYPHQNSSSTASFTSNGSPSSHQECHSYPIDLYHSPDNNCGSPISRSCLTDDAADDLRHKIRELETAMLGPDADGLDVYSITEPIHPLLPVQDAGWKDVADIISRRDLKEMLCACARAIDENDMLTGEWLVSELRGMVSVSGEPIQRLGAYLLEALVARTASSGSSIYKALKCKEPIGAELLSYMHVLYEICPYFKFGYLSANGAIAEAIKGENRVHIIDFQIAQGNQWITLMQALANRPGGPPKVTITGIDDSTSAFARGGGLEIVRKRLLILAESLKIPFEFHGIAGSASEIQREDLKVQPGEAIAVSFSLVLHHMPDESVGSQNHRDRILQLVKSLSPKVVTVVELESNNNTAPFLSRFLQTLKYYTAVFESIDVTLPRDHKERINVEQHCLARDIVNLVACEGTERIERHELFRKWRSRLFMAGFKPHPLSPFVNATIEALLKNYCDKYTLEERDGVLYLGWLNQNLVTSSAWI 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35108031 35111294 + MELO3C014133.2.1 Cme06g02786 331935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02786 545 MobiDBLite consensus disorder prediction 1 24 - -
Cme06g02786 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Cme06g02786 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 544 IPR005202 -
Cme06g02786 545 Pfam GRAS domain family 176 544 IPR005202 -
Cme06g02786 545 MobiDBLite consensus disorder prediction 65 87 - -
Cme06g02786 545 PANTHER GIBBERELLIN-RESPONSIVE PROTEIN, PUTATIVE-RELATED 17 544 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02786 Cme-Chr6:35108031 Cme11g00929 Cme-Chr11:12896452 0 dispersed
Cme06g02786 Cme-Chr6:35108031 Cme04g02627 Cme-Chr4:32120122 2.90E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41578 PF03514 GRAS 3.40E-128 CL0063 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02786 - - csv:101220072 1057.74