Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02799 ATGATGCCCAGTGTAATGACAGAGTCATCAGATAAAGAGACAGAGGCATTTGTAGAGGTAGATCCAACGGGCCGATATGGGCGTTATCCCGAGCTTCTGGGAACAGGGGCGGTAAAGAAAGTGTACAGAGCTTTTGATCAAGAAGAAGGTATAGAAGTAGCTTGGAACCAAGTGAAATTAAGGAGTTTTTCAAATGATCCATCCATGATAGATAGGTTATATTCAGAGGTGAGATTGTTGAGAAGCTTAAAGAACAACAATATAATTGCCTTGTATGATGTTTGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACTGAGGTTTGTACAAGTGGGAACCTTAGAGAGTACAGGAAGAAACATAGACAAGTCTCTTTGAAAGCTTTGAAGAAATGGTCCAAACAAATCCTCAAGGGTTTGCAATATTTGCACACTAATGACCCTTGTGTAATTCATAGAGATCTCAATTGTAGCAACCTCTTTGTCAATGGCAATGTTGGTCAGGTAAAGATTGGTGACTTGGGTTTGGCAGCAACAATAAGAAAGAATCACTCAGCTCATTCAGTGCTTGGAACACCAGAATTCATGGCACCTGAGTTATATGAAGAGCATTACACTGAGCTTGTGGATATATATTCATTTGGAATGTGTTTGCTTGAATTAGTCACTCTAGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTACAAGAAAGTCTCCTCAGGCATCAAGCCTCAAGCCCTTGGCAAGGTCAAAGACCCTGAAGTCAAGGCTTTCATTGAGAATTGCCTTGCTGAATCCCGAGTCCGGCCTTCCGCCGCCGACCTCCTCCGCCACTCCTTTTTCAGAGAAATTGATGATGACGAAAACGAAGACGACAATAACGATCATTAG 903 41.31 MMPSVMTESSDKETEAFVEVDPTGRYGRYPELLGTGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVRLLRSLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLQYLHTNDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATIRKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPQALGKVKDPEVKAFIENCLAESRVRPSAADLLRHSFFREIDDDENEDDNNDH 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35203988 35206541 + MELO3C014138.2.1 Cme06g02799 331948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02799 300 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Cme06g02799 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 299 - -
Cme06g02799 300 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02799 300 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g02799 300 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Cme06g02799 300 SUPERFAMILY Protein kinase-like (PK-like) 31 292 IPR011009 -
Cme06g02799 300 CDD STKc_WNK 25 285 - -
Cme06g02799 300 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02799 Cme-Chr6:35203988 Cme11g00927 Cme-Chr11:12867198 7.08E-164 dispersed
Cme06g02799 Cme-Chr6:35203988 Cme11g01446 Cme-Chr11:21379247 5.02E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64986 PF00069 Pkinase 4.40E-50 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02799 K08867 - csv:101221172 572.007