Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02803 ATGAAGTCGAATCCAACCGGATCAATGGAAACTGGTTTCTTGGGAAACCTTTCTTCTTCTTCCTTTCGAAATTTCCTTCCGCGATCCATCTCTTCTAAGAAAAGCCTCATTTCCTCCATTTCTAAGAAAACCCACAAATCTAACTCTGAAAATACGCCTCCTATTCACCCTAACATTCCCCTCAACAACCATGAAATTCCCATTTCTAAGCCCCCCTTTGATTCCAGTCTCGATCTCTCTGTATCGCAATCTCTTAGTTTGAAGGATGAAGTTGTTCAATCGGACAGTCAGTGTGAAGTTCCTAACCCCCCTGATCCACCCATCAAGATCTGTGATTTCTTCTTGTCTTTTGTATTTTCTTGTGAAGTTCCTAACACCCCAGATCCACCCATCAAGGTTGTTGTCAGGATTAGACCTAATGATAAAGAGAATGAAGTGGAAAGGACGGTTAAGAGGATTTCTTTAGATGAATTGACGTTTGGGGACCGGAAATTTTCCTTCGATTCGGTTTTCGATTCAGATTCGAAACAGGAAGATATCTTTTCGAAGATTGGAATTCCGCTAGTCAAAGATGCATTGGCTGGTTATAATACTTCCATCATGTCATTTGGTCAGACGGGAAGCGGTAAGACATTCACAATGTGGGGTCCCCCAAGTGCCATGGTTGAAGATCCTTCACCCCTTAGTAACCAAGGCCTTGCTCCTCGCATCTTCCAAATGCTGTTTTCAGAGATTCAAAAAGAACAAGAAAACTCTGAAGGAAAATTGATAAATTATCAGTGTCGTTGCTCTTTTGTAGAGATATTTAATGAACAGATTGGGGATTTGCTTGATCCTACACAAAGGAACCTTAAGATAAAGGATGATGCGAAGAATGGATTGTATGTGGAGAATGTTACAGAGGAATACGTGACAAGTTATGATGATGTGACTCAGATTCTTATCAAGGGACTTTCGAGCAGAAAAGTCGGAGCAACCACTATAAATTCTAAGAGCTCTAGGTCTCATATTGTGTTTACTTTCATCATTGAGTCATGGTGCAAGGAAACATCATCCAAGTGTTTTGGTAGTTCAAAGACAAGCAGAATCAGCCTTGTTGATCTTGCTGGATTAGATAGGAATGTAACCGATGCCACAGGCAGACATTCCACAAGAGAAGGAAAGAATTTGAAGAAGTCTATGTCACGGCTTGGGCATTTGGTCGATTCATTATCTAAAGAAACTGAAAGACCATCAGAAGATCGTTTGTACAGAGGTTCCTGCTTGACCCATTTATTAAGAGAGTCATTGGGGGGAAATGCTAAGCTCACAGTTATTTGTGCTATCTCTCCAGATAACAAGTACATATCACCTACTGGTGAGACATTAAGGACGTTAAGATTCGGACAACGATTGAAATCTGTAAAGAATCAACCAATCATAAATGAAATAAAGGAAGATGACGTAAATGATCTGAGTGATCAAATTCGTCAACTAAAGGAAGAACTTATAAGAGCAAATGCCAACTCAGGGAAGTCAGTTCGAAAGACTGGTTACTTTCAGGGGCCTAACGTAAGAGACAGCCTGAATCATTTAAGAGTTAGTATCAATCGCTCTCTGATTTTGCCATGCATTGATAACGACTCAGACGAAGAGGTTAGTTGTAATGAGGAAGATGTGAGGGAATTGCATCAGCAACTGGATAAGGCCCACAGCTTTTCAGAAGAGAACTCGGATAAAAGAGATTCACTTCACTTTTCTTCTGTAGGAGAAAGTTTTGCTTCATATTCAATGAGTGATGATGAAGTAAGTTATCCCCAAACAATGGAAGAAATAAACCCTGTAGAACATCATGATGAAAATTTTCATGAGGACAAGATTATTTTAACAGATAATCTTAGTAGCCATGATTCCAAGGTTCCTGATCCAGTGAATCGAAGGAGTATTTCTGTCAGCTCATTCTATCACTTTCCTAATCTTGAAGATCCACCCTTGTCTGAGTCTCCAAAAATTGGAAATTCTCAAAGGAAAAGTTTGGCTGTTGCACCAAGTTTTGCAGACCATCATGGAAGTAAGATGTCAGACAGCTTTAAGTTTAACAAAGATGTACTGAGGCAGTCACTGAGTCAGAGTAAAAGCATCAGATCCTCGTTGCGATCGAGCAATAATTTTGAGGATCCTACAGAGTCATTGGCAGCTAGTCTTCAAAGAGGTTTAAAGATAATTGATTATCACCAGCAAAGCTCAGCATTAAACAAATCTTCAGTATCCTTCTCCTTTGAACACCTGGCTCGAAAATCATGTCCAGAAGTCAACAAAGCTGTAGGGTCTCTTCAAACACTCGAAGAAGACAATGCCGTTGCCATATCTTCTCCCCATCAGCTTTGTGCATCTTGCAAAAGAAAAATTACCGAGAACGACAGTAATGAAGTACCGAGTAGCAACAACGAACTTGCAGCAGTTAACCAATCCAGGAATCTCAATGCCATTGTAGGACTCAACCAGTTAGACGATCTTGAAAAGGAGAGTGCACAAGAGAAATGCGAAATAAAGGAAATGCAGGAAGTTCAGAGCAATGAAAATTGCTTTACTGATGTGTCTGAGAAGGAAGAACTTCTTAAAGAAATTCAAAATCTAAGGAGTAAGCTGCAAACATTTGCTGATGTTTCAGCTAACAAGTCAACTGACAAGCTGAGATCCTCACTATTGCTGTCACGCTCGATCCACCTCAGAAAAAGCTGTCTAGGAGGAGGAGGAGGAGGAGGAGGTTCCCAAACTACTAACGAGGCGGAACTTGAAAAGGAAAGGGAGAGATGGACTGAAATGGAGAGTGAGTGGATTTCTTTAACTGATGAACTGAGGGTTGATTTGGAATCCATTCGACAGCGTGCGGAGAAGGTGGAGCAGGAACTGAACACAGAGAAGAAGTGCAATGAGGAGTTGGAGGACGCACTTCACAGATCTGTTCTTGGACATGCTAGATTTGTTGAGCATTATGCTGAATTGCAAGAGAAGTATAATGAGTTGGTTGGTAAGCATCGTGCCATCATGGGTGGAATAGCAGAGGTGAAAAGGGCTGCACAAAAGGCTGGCTCCAAAGGCCACGGTTCTCGGTTTTCGAAATCACTTGCTGCCGAGCTTTCAGCTCTGAGATTTGAGAGAGACAGAGAGAGAGAATTCTTGAAAAAGGAAAACAAAAGCCTTAAGCTCCAACTTAGAGACACTGCGGAAGCTGTCCATGCTGCTGGGGAACTTCTCGTAAGACTTAGAGAAGCAGAACATTCAGCATCAGTTGCAGAGGAGAGTTTTACATCAGTTCAACAAGAGAACGAGAAGTTGAAGAAGCAAATGGAGAAGCTCAAAAGAAAACACAAAATGGAGATGATTACAATGAAGCAGTACCTTGCAGAGAGCAAACTGCCAGCTTCAGCTCTTGAACCACTGTATCACGACGATCACTCCGATGTCGGAATCGACAAGAGAGCCTCGTATGTGGACGATGATCAAGCCTGGAGATCAGAATTTGGAGCTATATATCAAGAGCAGCATTATTAA 3534 41.4 MKSNPTGSMETGFLGNLSSSSFRNFLPRSISSKKSLISSISKKTHKSNSENTPPIHPNIPLNNHEIPISKPPFDSSLDLSVSQSLSLKDEVVQSDSQCEVPNPPDPPIKICDFFLSFVFSCEVPNTPDPPIKVVVRIRPNDKENEVERTVKRISLDELTFGDRKFSFDSVFDSDSKQEDIFSKIGIPLVKDALAGYNTSIMSFGQTGSGKTFTMWGPPSAMVEDPSPLSNQGLAPRIFQMLFSEIQKEQENSEGKLINYQCRCSFVEIFNEQIGDLLDPTQRNLKIKDDAKNGLYVENVTEEYVTSYDDVTQILIKGLSSRKVGATTINSKSSRSHIVFTFIIESWCKETSSKCFGSSKTSRISLVDLAGLDRNVTDATGRHSTREGKNLKKSMSRLGHLVDSLSKETERPSEDRLYRGSCLTHLLRESLGGNAKLTVICAISPDNKYISPTGETLRTLRFGQRLKSVKNQPIINEIKEDDVNDLSDQIRQLKEELIRANANSGKSVRKTGYFQGPNVRDSLNHLRVSINRSLILPCIDNDSDEEVSCNEEDVRELHQQLDKAHSFSEENSDKRDSLHFSSVGESFASYSMSDDEVSYPQTMEEINPVEHHDENFHEDKIILTDNLSSHDSKVPDPVNRRSISVSSFYHFPNLEDPPLSESPKIGNSQRKSLAVAPSFADHHGSKMSDSFKFNKDVLRQSLSQSKSIRSSLRSSNNFEDPTESLAASLQRGLKIIDYHQQSSALNKSSVSFSFEHLARKSCPEVNKAVGSLQTLEEDNAVAISSPHQLCASCKRKITENDSNEVPSSNNELAAVNQSRNLNAIVGLNQLDDLEKESAQEKCEIKEMQEVQSNENCFTDVSEKEELLKEIQNLRSKLQTFADVSANKSTDKLRSSLLLSRSIHLRKSCLGGGGGGGGSQTTNEAELEKERERWTEMESEWISLTDELRVDLESIRQRAEKVEQELNTEKKCNEELEDALHRSVLGHARFVEHYAELQEKYNELVGKHRAIMGGIAEVKRAAQKAGSKGHGSRFSKSLAAELSALRFERDREREFLKKENKSLKLQLRDTAEAVHAAGELLVRLREAEHSASVAEESFTSVQQENEKLKKQMEKLKRKHKMEMITMKQYLAESKLPASALEPLYHDDHSDVGIDKRASYVDDDQAWRSEFGAIYQEQHY 1177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35242146 35248937 + MELO3C014142.2.1 Cme06g02803 331952

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02803 1177 Coils Coil 829 849 - -
Cme06g02803 1177 Coils Coil 1089 1123 - -
Cme06g02803 1177 Coils Coil 475 502 - -
Cme06g02803 1177 Gene3D Kinesin motor domain 128 509 IPR036961 -
Cme06g02803 1177 MobiDBLite consensus disorder prediction 655 686 - -
Cme06g02803 1177 MobiDBLite consensus disorder prediction 908 929 - -
Cme06g02803 1177 Coils Coil 862 882 - -
Cme06g02803 1177 Coils Coil 1051 1071 - -
Cme06g02803 1177 PANTHER CENTROMERE PROTEIN E 804 1175 - -
Cme06g02803 1177 PANTHER CENTROMERE PROTEIN E 112 819 - -
Cme06g02803 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 501 IPR027417 -
Cme06g02803 1177 ProSiteProfiles Kinesin motor domain profile. 130 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cme06g02803 1177 PANTHER KINESIN-LIKE PROTEIN KIN-12F 804 1175 - -
Cme06g02803 1177 PANTHER KINESIN-LIKE PROTEIN KIN-12F 112 819 - -
Cme06g02803 1177 MobiDBLite consensus disorder prediction 37 67 - -
Cme06g02803 1177 MobiDBLite consensus disorder prediction 1 22 - -
Cme06g02803 1177 MobiDBLite consensus disorder prediction 703 722 - -
Cme06g02803 1177 PRINTS Kinesin heavy chain signature 195 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cme06g02803 1177 PRINTS Kinesin heavy chain signature 362 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cme06g02803 1177 PRINTS Kinesin heavy chain signature 415 436 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cme06g02803 1177 PRINTS Kinesin heavy chain signature 326 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cme06g02803 1177 MobiDBLite consensus disorder prediction 37 58 - -
Cme06g02803 1177 Coils Coil 943 977 - -
Cme06g02803 1177 Pfam Kinesin motor domain 151 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cme06g02803 1177 SMART kinesin_4 128 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02803 K10400 KIF15; kinesin family member 15 - csv:101203593 2016.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00871 Cme-Chr6:5987374 Cme06g02803 Cme-Chr6:35242146 3.44E-07 dispersed
Cme06g02803 Cme-Chr6:35242146 Cme11g00502 Cme-Chr11:5029012 8.12E-82 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g604 . . . . Bpe09g00138 . Bma10g00586 Bma13g01105 Cmo16g00977 . . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1198 Cone15ag1218 . Csa03g00446 . Cme06g02803 Blo07g00875 . Bda05g00688 . . Bpe03g00762 . . . . . . Cma16g00939 . Car16g00903 Cpe14g00763 . Bhi11g00510 . . . . . . . . . . . . . Lsi05g00529 . Chy06g01871 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004807 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 40