Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g02805 ATGGCTCTACAGAGGAATAATTTAGGTTCAATAAAAGAGCCTCGCTCTGTAGTTAAGAAGTTTCTTGCTAGACCTCAACATGAAGGTCTTGGAGCTGTTGTTAGAAGAAGCATCGGCAGGTTTGAGCTTAAATACTTTGATCCATTCCTTGTTCTTGATGAGTTTTCTGGAAGAATTGAAGGTGGTGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTTCACTCTGAAATGCCTTCTTCCATTGGCACCCAACGTGGCTTACAACTTTGGATCAATCTTTCCTCCAAACACAAAATGATTGAACCGAGGTATCAAGAAATACACAACGAGAACATAGTGGAAGCTACAAGAGAAGGAGTAAAAGTGAGAGTGATAGCAGGCGAAGCCTTGGGAGCAAAATCCTCAATCGACACGAAAACTCCAACCATGTACTTGGACTTCACTCTTGCCCCGGGATCTCGCATCGAGCAGTCAATCCCAATGGGATGGAATGCGTTCGTGTACGTACTAGAAGGCGATGGCGGAGTATTCGGAAGCATGAAATCGATGCCAACGGTTACACCACATCACCTTCTTTTGTTAGGGAATGGGGATGGGTTAGAGGTGTGGAACAAGTCATCCTCCAAAACCCTAAGGTTCATATTGGTTGGAGGTCAGCCATTGAATGAGAGTGTTGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGAGGATTTTGAGAATTGTACAAATGGCTTTGAGAGGGCAAGGCATTGGAAGAGTTCACAGCCTTAA 798 44.49 MALQRNNLGSIKEPRSVVKKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSGRIEGGDLQWMTAGKGIVHSEMPSSIGTQRGLQLWINLSSKHKMIEPRYQEIHNENIVEATREGVKVRVIAGEALGAKSSIDTKTPTMYLDFTLAPGSRIEQSIPMGWNAFVYVLEGDGGVFGSMKSMPTVTPHHLLLLGNGDGLEVWNKSSSKTLRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERARHWKSSQP 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 35254658 35256624 - MELO3C014144.2.1 Cme06g02805 331954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g02805 265 CDD cupin_pirin_C 142 221 - -
Cme06g02805 265 PANTHER - 9 56 - -
Cme06g02805 265 PIRSF Pirin 56 261 IPR012093 -
Cme06g02805 265 PIRSF Pirin 13 57 IPR012093 -
Cme06g02805 265 PANTHER - 56 263 - -
Cme06g02805 265 Pfam Pirin C-terminal cupin domain 145 253 IPR008778 -
Cme06g02805 265 PANTHER PIRIN-RELATED 9 56 IPR012093 -
Cme06g02805 265 Gene3D Jelly Rolls 55 226 IPR014710 -
Cme06g02805 265 PANTHER PIRIN-RELATED 56 263 IPR012093 -
Cme06g02805 265 Pfam Pirin 57 92 IPR003829 -
Cme06g02805 265 SUPERFAMILY RmlC-like cupins 15 262 IPR011051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g00973 Cme06g02805 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02805 Cme-Chr6:35254658 Cme07g01841 Cme-Chr7:23878791 2.35E-107 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g02805 K06911 - csv:101204082 471.47