Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00015 ATGATCATTCCGTCACCAGAGATAGTAATGGCGCTAATTCAGCCACACACTCCAGCTTCTTCAATTTCATCTTCATCCGCCTCATTCTACGGAACGTATCTTCAACAGCTCCGTCCGCTCACCACAACCCTTAATCTTCGAAGCAACCACTCTATCTCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGTGTTCTGATCTTCTCTGCAGTTCCTTTCACGGCGGTTAAAGCCATTGCCAATAGCCCGCTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAAATCTGCCGTAGCCAACTCTTCCAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGCTCGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAGTATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTCCAGAAATACTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTAGGTGCTTTAGTTCCAGAGATCTTGGATATTTTTGGAGCGTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAAGGAGATACACTTGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATCGTCATTGCAATTTGCCAAGCTATTTTGATGGATGGGCGACGGGCGACAAGTCACTGCAACAATTAG 768 46.35 MIIPSPEIVMALIQPHTPASSISSSSASFYGTYLQQLRPLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVKAIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMDGRRATSHCNN 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 145825 158101 - MELO3C017067.2.1 Cme07g00015 332031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00015 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 54 246 - -
Cme07g00015 255 Pfam Chlorophyll A-B binding protein 139 239 IPR022796 -
Cme07g00015 255 Gene3D Chlorophyll a/b binding protein domain 129 253 - -
Cme07g00015 255 SUPERFAMILY Chlorophyll a-b binding protein 121 238 - -
Cme07g00015 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 246 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00015 Cme-Chr7:145825 Cme08g00161 Cme-Chr8:1126903 1.83E-31 dispersed
Cme07g00015 Cme-Chr7:145825 Cme11g01575 Cme-Chr11:23355951 1.08E-31 transposed
Cme07g00015 Cme-Chr7:145825 Cme08g00160 Cme-Chr8:1124451 5.89E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00015 K14172 - csv:101209460 454.136