Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00023 ATGGAGAAGGGGCCAACTACTGTTTCAGCCATGGAAGCCTTCGAGAAGCTGGAGAAGGTCGGAGAAGGAACTTATGGTAAGGTTTATAGGGCAAGGGAGAAGGCCACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTCCATGAAGATGAGGAAGGTGTTCCTCCTACCACTCTCAGAGAGGTTTCGATTCTAAGAATGCTTTCTCGGGATCCTCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGAAAAACCGTCCTTTACTTGGTGTTTGAATACATGGATACGGATCTGAAGAAATTCATCAAGAGTTTCCGTCATACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTATCAACTCTGCAAGGGCGTTGCCTTCTGTCATGGCCATGGAATCCTGCACAGGGATCTGAAACCACACAATCTCTTGATGGACCGAAAGACTATGATGCTCAAAATTGCAGACCTCGGGTTGGCTCGAGCATTTACTGTCCCAATTAAGAAGTATACTCATGAGGCAAGTCTTTTGCTGTTTACACATGGCATGGCCGTGTTGAATGGATCTAACCTTTTGTGTGTCCTCCAGATACTAACCCTCTGGTATAGAGCTCCCGAAGTTCTGTTGGGGGCAACTCATTACTCTACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGCCTCTCTTTCCTGGAGATTCTGAGTTGCAGCAGCTCCTTCATATCTTCAGGTTATTAGGGACCCCAAATGAAAAGGTCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAGTATCCCCAGTGGAACCCCCAAAGCCTTTCAACTGCAGTCCCCAACTTGGATGATAAAGGGCTTGATCTGCTTTCAAAGATGTTGAAGTACGAACCCTCAATGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTACTTTGATGACTTGAACAAGGAATGTCTCTGA 1008 46.43 MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRHTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEASLLLFTHGMAVLNGSNLLCVLQILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQPLFPGDSELQQLLHIFRLLGTPNEKVWPGVSKLMNWHEYPQWNPQSLSTAVPNLDDKGLDLLSKMLKYEPSMRISAKKAMEHPYFDDLNKECL 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 192057 194319 - MELO3C017059.2.1 Cme07g00023 332039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00023 335 Gene3D Transferase(Phosphotransferase) domain 1 102 334 - -
Cme07g00023 335 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Cme07g00023 335 PANTHER - 7 332 - -
Cme07g00023 335 PANTHER CELL DIVISION PROTEIN KINASE 7 332 - -
Cme07g00023 335 SUPERFAMILY Protein kinase-like (PK-like) 9 331 IPR011009 -
Cme07g00023 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cme07g00023 335 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Cme07g00023 335 ProSiteProfiles Protein kinase domain profile. 14 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00023 335 Pfam Protein kinase domain 14 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00023 335 SMART serkin_6 14 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00023 Cme-Chr7:192057 Cme08g02049 Cme-Chr8:25862569 5.43E-146 dispersed
Cme07g00023 Cme-Chr7:192057 Cme10g00639 Cme-Chr10:4065775 2.35E-81 transposed
Cme07g00023 Cme-Chr7:192057 Cme03g02180 Cme-Chr3:28832662 2.63E-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64988 PF00069 Pkinase 4.80E-67 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00023 K07760 - csv:101208001 621.698