Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme07g00024 | ATGTCGGGATCTGAGACCGGAGTCATATCCAGCGGCGAACACTTCACCATCGGTCTTCAAAAGAATTCAGTACAGTCACAGCAGCCAGTCATGCAGAGCATGCATTTACCCTTCGGCGCAGATGGCGTCTATAAGCCCGTTACCGCGGCCTCTCCCACCTACCAATCCTCCAACGTCGGAGTTGCCGGTAATGCCGGTGCCGATGGATCTGCTCGTGAAGCTTTCGTTAACATGAATTCGCAAAGCGAGCCTGTAAAGAGGAAGAGAGGGAGACCTCGAAAGTATGGGCCAGATGGCAGTATGTCAGTGGCTCCTGCAGTCCGCCCTGCCGCTGCAACTCAGTCCAGTGGAGGTTTTTCTCCGTCACCGACTGCCGCCCCTCAGTCAGGAGGATCAACTTCTCCAACTTCTTTGAAGAAACCCAGAGGCAGACCCCCTGGCTCCTCCACCAAAAAACATCAGTTGGATTCTTCGGAGTCAGGAGGAGTTGGATTTACCCCACATGTCATCACCGTAAAAGCTGGAGAGGATGTTTCTTCGAAAATAATGTCATTTTCACAGAATGGTCCTAGAGCTGTTTGTATTCTTACAGCAAATGGTGCAATATCCAATGTGACGCTACGTCAGCCAGCCATGTCCGGTGGAACTGTGACTTACGAGGGGCGATTCGAGATTTTATCGTTATCTGGGTCCTATCTCCTCTCAGAGAATGGCGGCCAGCGGAGTCGAACTGGAGGGCTAAGTGTTTCCTTATCTGGACCAGATGGTAGAGTATTAGGTGGTGGGGTGGCTGGTCTTCTAACGGCAGCATCTCCTGTACAGGTGGTCGTGGGGAGTTTCGTCACTGATGTGGGGCACAAGGAATTGAGACAAGTAAACCAAATAGAACAGCCGCCTGTTTCTGCACCCCATAAACTTGCTCCGATCCGTGCTGGAATGACGGGGGCCAGCAGCCCTCCATCGCGTGGGACTCTGAGTGAATCCTCAGGAGGGCCCGGGAGTCCATTTAATCAGAGTGCTGGAGCCTGCAACAATAACACCATACCTTGGAAGTGA | 1056 | 52.46 | MSGSETGVISSGEHFTIGLQKNSVQSQQPVMQSMHLPFGADGVYKPVTAASPTYQSSNVGVAGNAGADGSAREAFVNMNSQSEPVKRKRGRPRKYGPDGSMSVAPAVRPAAATQSSGGFSPSPTAAPQSGGSTSPTSLKKPRGRPPGSSTKKHQLDSSESGGVGFTPHVITVKAGEDVSSKIMSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVTDVGHKELRQVNQIEQPPVSAPHKLAPIRAGMTGASSPPSRGTLSESSGGPGSPFNQSAGACNNNTIPWK | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 197832 | 201647 | + | MELO3C017058.2.1 | Cme07g00024 | 332040 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme07g00024 | 351 | MobiDBLite | consensus disorder prediction | 77 | 165 | - | - | |
Cme07g00024 | 351 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 165 | 290 | - | - | |
Cme07g00024 | 351 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 167 | 281 | IPR005175 | - | |
Cme07g00024 | 351 | MobiDBLite | consensus disorder prediction | 310 | 351 | - | - | |
Cme07g00024 | 351 | Gene3D | - | 167 | 297 | - | - | |
Cme07g00024 | 351 | CDD | DUF296 | 166 | 280 | IPR005175 | - | |
Cme07g00024 | 351 | ProSiteProfiles | PPC domain profile profile. | 161 | 301 | IPR005175 | - | |
Cme07g00024 | 351 | SMART | AT_hook_2 | 86 | 98 | IPR017956 | GO:0003677 | |
Cme07g00024 | 351 | SMART | AT_hook_2 | 139 | 151 | IPR017956 | GO:0003677 | |
Cme07g00024 | 351 | MobiDBLite | consensus disorder prediction | 317 | 351 | - | - | |
Cme07g00024 | 351 | MobiDBLite | consensus disorder prediction | 113 | 139 | - | - | |
Cme07g00024 | 351 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 | 15 | 345 | - | - | |
Cme07g00024 | 351 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 15 | 345 | IPR039605 | GO:0003680 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme03g01327 | Cme07g00024 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g01821 | Cme-Chr5:27092163 | Cme07g00024 | Cme-Chr7:197832 | 3.15E-45 | dispersed | |
Cme06g02478 | Cme-Chr6:31751191 | Cme07g00024 | Cme-Chr7:197832 | 5.33E-62 | dispersed | |
Cme07g00024 | Cme-Chr7:197832 | Cme11g02151 | Cme-Chr11:28950150 | 4.98E-66 | dispersed | |
Cme03g01327 | Cme-Chr3:22821262 | Cme07g00024 | Cme-Chr7:197832 | 2.10E-122 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme07g00024 | - | - | csv:101207513 | 631.713 |