Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00027 ATGGGGCTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAATTATACCATTTCAAGGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCTTACGATCTCTTCAGCATCTCTCCCATTATGATCATCCTTGGACGTGTCTACTATCAGGACAAAAACTACGAGATTCCCGCCACCGTCAAATCCGCTATGCTCGCAGTGGCCCTTCTGGGAACGGCGATGGGTCAACTGGTGTTTGGCATACTCGGAGATAGAGTGGGACGTCGGCGAGTGTACGGACTGGCATTGGCGCTGATGGTGATGAGTTCAATTGGGTGTGGGTTTTCAATCTGTACCACAAGAAGCTGTGTCCTTGTGAGCCTAGGGTTTTTCAGGTTCCTTCTAGGGCTGGGAATTGGGGGAGATTACCCATTGTCGGCAACCATTATGTCGGAGTTCGCCAACAAGAAGACGCGTGGAGCTTTCATAGCGGCGGTGTTCTCGATGCAGGGATTTGGGATTTTGGCCAGTGCCACGGTGACCATGGTCGTGTGCTCCATATTCGATCGGGCCTCGAATTTCCCAACAGGTAAACGTACGCCGATGGGGGCGGATATTGCTTGGAGGCTGATCCTCATGCTGGGCGCTGTTCCGGCGGCCATGACTTATTACTGGCGAATGATGATGCCGGAAACTGCCAGATACACAGCTTTGGTGGAGCGCAACGTGGCACAAGCAGCAAAGGACATGGAGAAAGTGTTGGATGTTTCCTTGGTTGATATCATGGAAGATAGCCCTATGTCCCCTTCACCTCCTCCAAATTTCCCTTTCTTTTCCAACCAATTCCTTCGTCGCCATGGCCGAGACCTCTTTGCATGCGCCGCCTCTTGGTTCCTTGTCGACATTGTCTTCTACAGCAGCAACCTCTTCCAGTCCAAAATCTACACCCAATTCCTTCCCCACAACCAAGATTCCACCAATAACGTTTACCATCAAGCCTTCAATGAAGCCAGACTCCAAGCCATCGTCGCTGTCTGTTCCACCATTCCTGGCTACTGGATCTCCGTCTTCTTCATCGATCGCCTTGGTCGAGTCACTATCCAAATCCTGGGATTTCTGTTCATGGCCATTGGCTACGTTATCATCGCCATCCCCTACGACTCTTTCTGGGCATCTGATAAACATAAATACGGTTTCATGCTATTTTATTGCCTCACCTTCTTCTTCTCAAACTTCGGCCCTAACACCACCACTTTTATTCTCCCCGCGGAGCTGTTCCCGGCTAGATTTAGGTCCACCTGCCATGGAATCTCTGGCGCCTCTGGAAAAATTGGGGCCATCATTGGAGCGGTGGGGTTCCTTTGGGCCTCTCACGATCAAAAGGACAACGGAATTGGGATGAAGGCTTCGTTGATGTTGCTTGGTGGGGTGAGTTTAGCGGGAGTGGCAGTCACGTATTTCTTCACGAGAGAGACTAATGGAAGGTCGTTGGAAGAGAATGAGAATGAAGATGAATATGCTGGGATTTTCTTTCTTAGGGGCTTTAACTTTCACCATACTACTGCTGCTGCTGCTGTTGCAAGCTCCCGTTTGTCATCTTCTGGTGCTCAAGGCGATGACGTATCATCACGTTCCACATCAAACTCAATTCCAAGCACTACACCATTTCATCCATCGTTAGCTTAA 1671 50.39 MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSISPIMIILGRVYYQDKNYEIPATVKSAMLAVALLGTAMGQLVFGILGDRVGRRRVYGLALALMVMSSIGCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASATVTMVVCSIFDRASNFPTGKRTPMGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVSLVDIMEDSPMSPSPPPNFPFFSNQFLRRHGRDLFACAASWFLVDIVFYSSNLFQSKIYTQFLPHNQDSTNNVYHQAFNEARLQAIVAVCSTIPGYWISVFFIDRLGRVTIQILGFLFMAIGYVIIAIPYDSFWASDKHKYGFMLFYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGASGKIGAIIGAVGFLWASHDQKDNGIGMKASLMLLGGVSLAGVAVTYFFTRETNGRSLEENENEDEYAGIFFLRGFNFHHTTAAAAVASSRLSSSGAQGDDVSSRSTSNSIPSTTPFHPSLA 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 205596 208518 + MELO3C017055.2.1 Cme07g00027 332043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00027 556 MobiDBLite consensus disorder prediction 528 556 - -
Cme07g00027 556 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cme07g00027 556 Gene3D MFS general substrate transporter like domains 17 504 IPR036259 -
Cme07g00027 556 CDD MFS_PhT 22 487 - -
Cme07g00027 556 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Cme07g00027 556 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 488 IPR020846 GO:0022857
Cme07g00027 556 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 500 - -
Cme07g00027 556 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 1 500 - -
Cme07g00027 556 Pfam Sugar (and other) transporter 23 496 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01069 Cme-Chr6:7842339 Cme07g00027 Cme-Chr7:205596 1.77E-155 dispersed
Cme07g00027 Cme-Chr7:205596 Cme01g01455 Cme-Chr1:18847114 9.42E-14 dispersed
Cme07g00027 Cme-Chr7:205596 Cme05g00564 Cme-Chr5:5659701 2.43E-176 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00027 K08176 - csv:101218554 955.666