Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00058 ATGGCTGGATCGGATGAGAACAACCCTGGAGTGATCGGACGGGCAAATCTCCATGGGAATTTACGAATTGGTGGTGGTGGCGGTGGCAAATTCGTGGTGGGGATGGGTCAAAACCGCAGAGCTTTGAGCAGCATTAATGGAAATGTTGCAGCAGCACCTCCTGCCCCTCATCCCTGTGCCGTCCTGAAAAGAGGCTTAACAGAAACTGAAGTTTTCCTCAACAATAAAGACCCTCCGATTCCAATTCATCGACCCATCACTCGGAAGTTTGCAGCTCAGCTGGCCAATAAGCACCAACCACCTGTGCCTGAGATAGATAAAAAACCACTGCAATCTGCTGTAACTCGAAAGGAGTCTTCAGATCACCACACCACCATAGAGGAAGATGATTCCATGGGTGAATCAGCAGTTCCAATGTTTGTTCAACACACAGAAGCAATGTTGGACGAAATTGACAGAATGGAGGAGGTGGAAATGGAAGATATAGAAGAAGAACCAGTCATTGACATAGACAGCCGCGATAAAAGTGATCAACTAGCTGTTGTGGAGTACATTGATGACTTGTATGCTTACTATAGGAAATCCGAGGTTTCTGGCTGTGTCTCACCAAACTACATGGCTCAGCAAGCAGATATCAACGAGAGGATGAGAGGGATTCTCATTGACTGGCTAATTGAGGAACTAACAAAGCAGAACATGATGATTGCTTCAAAGGTACACTACAAATTTGAGCTGATGGAGGAGACATTGTACTTAACAGTCAACCTGATCGACAGATTCTTGGCGGTTCACTCAGTTGTGAGAAAGAAACTCCAGCTTGTTGGAGTGACAGCCATGCTTATTGCCTGCAAGTATGAAGAGGTTTCTGTTCCTGTTGTGGATGATCTTATTCTCATATCTGACAAGGCCTACAGCCGGAAAGAAGTTCTTGACATGGAGAAGTTGATGATCAATACTTTACAGTTCAATCTGTCTGTTCCAACTCCTTATGTCTTCATGAGGAGGTTTCTCAAAGCTGCACAATCTGATAGAGAGCTGGACCTCCTCTCCTTCTTCATGGTGGAGCTCTGTCTAGTAGAATATGAAATGCTGAAGTATAGACCTTCATTAATGGCTGCTGCTGCAGTCTTCACTGCTCAATGCACATTGAATGGCTTCAAAGAATGGAGCAAAACCAGTGAGTGGCACACTGGGTATTCACAAGAACAACTTCTGGAATGTTCAAAGCTGATGGTGGGGTTTCATAAGAAAGCAGGGACAGGGAAATTGACAGGAGTTCACAGGAAGTATTGCACATCAAAGTTTGGATATGCTGCTAGAAGTGAGCCAGCAAGCTTTCTATTGGAAGAAAGGTTGTGA 1359 44.81 MAGSDENNPGVIGRANLHGNLRIGGGGGGKFVVGMGQNRRALSSINGNVAAAPPAPHPCAVLKRGLTETEVFLNNKDPPIPIHRPITRKFAAQLANKHQPPVPEIDKKPLQSAVTRKESSDHHTTIEEDDSMGESAVPMFVQHTEAMLDEIDRMEEVEMEDIEEEPVIDIDSRDKSDQLAVVEYIDDLYAYYRKSEVSGCVSPNYMAQQADINERMRGILIDWLIEELTKQNMMIASKVHYKFELMEETLYLTVNLIDRFLAVHSVVRKKLQLVGVTAMLIACKYEEVSVPVVDDLILISDKAYSRKEVLDMEKLMINTLQFNLSVPTPYVFMRRFLKAAQSDRELDLLSFFMVELCLVEYEMLKYRPSLMAAAAVFTAQCTLNGFKEWSKTSEWHTGYSQEQLLECSKLMVGFHKKAGTGKLTGVHRKYCTSKFGYAARSEPASFLLEERL 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 374287 377550 + MELO3C017022.2.1 Cme07g00058 332074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00058 452 PANTHER CYCLINS 27 445 IPR039361 -
Cme07g00058 452 CDD CYCLIN 325 412 IPR013763 -
Cme07g00058 452 Gene3D - 187 438 - -
Cme07g00058 452 PANTHER CYCLIN-B2-3-RELATED 27 445 - -
Cme07g00058 452 Pfam Cyclin, N-terminal domain 187 325 IPR006671 -
Cme07g00058 452 MobiDBLite consensus disorder prediction 110 130 - -
Cme07g00058 452 Pfam Cyclin, C-terminal domain 327 441 IPR004367 -
Cme07g00058 452 SUPERFAMILY Cyclin-like 326 444 IPR036915 -
Cme07g00058 452 MobiDBLite consensus disorder prediction 98 131 - -
Cme07g00058 452 Gene3D - 201 325 - -
Cme07g00058 452 SMART Cyclin_C_2 327 444 IPR004367 -
Cme07g00058 452 SUPERFAMILY Cyclin-like 176 324 IPR036915 -
Cme07g00058 452 CDD CYCLIN 216 316 IPR013763 -
Cme07g00058 452 SMART cyclin_7 237 318 IPR013763 -
Cme07g00058 452 SMART cyclin_7 331 413 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00058 Cme-Chr7:374287 Cme08g00990 Cme-Chr8:6469717 3.64E-166 dispersed
Cme07g00058 Cme-Chr7:374287 Cme04g00381 Cme-Chr4:3058212 2.30E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00058 K21777 - csv:101223199 815.453