Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00132 ATGGGTATATACCTTAGCAATCCCAAAACTGAGAAGTCCTCTGAAGACGGTGAGAATCAACGGCTTAGATATGGACTATCATCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAGTTCCTGATCTGGATGCCTGCACTTCCTTCTTTGGTGTTTATGATGGCCATGGAGGTAAGGTGGTTGCGAAGTTCTGTGCCAAGTACCTACATCAGCAAGTGAAGAAAAATGAAACTTGGGCGGCTGGAGATATAGGAGCTTCTGTGCAGAGAGCATTCTTCAGAATGGATGAAATGATGCGTGGGCAAAGAGGTTGGAGAGAATTAGCTGTTTTGGGAGATAGATTGAATAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCGCCAAAAAGCAGTGATGCAAATGACATGGCTGATGATTGGGCTTTTGAGGAGGGTCCGCACTCTGATTTTACTGGCCCTACTTCTGGTTGTACTGCTTGTGTTGCAATTATTAGAGATAGCAAACTTGTTGTTGCAAATGCTGGTGATTCTCGCTGTGTGCTATCGAGAAAGGGCCAGGCCTACAGTCTCTCTAGAGATCACAAACCCGATCTTGAGACTGAGAAGGATAGAATTCTGAAAGCTGGTGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGACATGGAATTTAAGCAGAATAAATATTTACCTGCCGAAAAGCAAATTATTACTGCCAATCCTGATGTGACAACTGTCGAGCTTTGCGATGATGATGAGTTTATTGTGATAGCTTGTGATGGTATATGGGATTGCATGTCTAACCAGCAACTGGTAGATTTTATACATGAACAGCTTAAATCATTTAAGAAAGATATTCAATCAAATTCCTCGCTGGATGATGGAACTTCACCCGTAGCCGCCCGTGCCAGTCCAGACAGTACAGAATCAATCCAAAAGGATGAGCTTAGCTAG 990 43.84 MGIYLSNPKTEKSSEDGENQRLRYGLSSMQGWRATMEDAHAAVPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNETWAAGDIGASVQRAFFRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPKSSDANDMADDWAFEEGPHSDFTGPTSGCTACVAIIRDSKLVVANAGDSRCVLSRKGQAYSLSRDHKPDLETEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKYLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLKSFKKDIQSNSSLDDGTSPVAARASPDSTESIQKDELS 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 859454 867196 - MELO3C016953.2.1 Cme07g00132 332148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00132 329 Pfam Protein phosphatase 2C 142 294 IPR001932 -
Cme07g00132 329 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Cme07g00132 329 Gene3D - 1 317 IPR036457 -
Cme07g00132 329 CDD PP2Cc 23 293 IPR001932 -
Cme07g00132 329 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Cme07g00132 329 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Cme07g00132 329 SUPERFAMILY PP2C-like 3 293 IPR036457 -
Cme07g00132 329 MobiDBLite consensus disorder prediction 299 329 - -
Cme07g00132 329 MobiDBLite consensus disorder prediction 299 319 - -
Cme07g00132 329 SMART PP2C_4 13 312 IPR001932 -
Cme07g00132 329 PANTHER PROTEIN PHOSPHATASE 2C 1 292 IPR015655 GO:0004722|GO:0006470
Cme07g00132 329 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 292 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00132 Cme-Chr7:859454 Cme05g01846 Cme-Chr5:27268241 6.01E-33 dispersed
Cme01g02548 Cme-Chr1:33435260 Cme07g00132 Cme-Chr7:859454 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00132 K17499 - csv:101211604 625.165