Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00133 ATGCAGGCAGATCAGACGGTGATAAGTTTGAGACCAGGTGGTGGCGGTGGCCTTCGTGGAAGCAGATTTGTTACCCCTCGCTTCGATTCATCCTCCGCCGACTCTTCCTCTCTTCGTCCACATGGCGGCGTTGCTTCAATCCTCAAGACTGGCGATCTACGGTTTGAAGGTCGTGAGCGAATCCAATACACCCGAGACCAGCTTCTGCAGCTTAGAGAGGTTGCAACAGTTCCCGAAGATATCTTGAAAGTCAAACTAGAAGTTGAGTCTGAGATAGGTGGGGAGGATCAAACATGGAACCGTGCTGAAAGCAATCCGCAACCACAATCTCAAAGCCGTTACTTTGAGCCAGACAGTCGAGATTGGCGTGGTCGATCAGGGCAGGTTCCGGGATCCACGGAGGAAGGACCTTGGGATGCAAATAAGGATATGTCTGGACAATCTGAGTCGAGGTTCCAAGACTCGAATAATAGGATTCAAGTTTCTGGTAACCAAGGGGTTGGTACACCTGCTCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGACGAGGTAATATCTCAGAGAAGGAACGGGTTTTGAAGACAGTTAAAGGTATACTTAATAAATTGACTCCGGAAAAGTTTGATTTACTCAAAGGTCAACTGATTGACTCTGGAATTACATCTGCTGATATTTTGAAGGATGTCATATCACTTATATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGATCTTAACGAGAAGCTTCCTTCATTTGCATCTGACGTGCCTGGAGAGAAAGATATCACTTTTAAAAGAGTTCTCTTAAACATTTGCCAAGAGGCATTTGAAGGTGCTGATAACCTTAGGGCAGAAATCAGGCAGATGACTAGTCCCGAGCAGGAAATGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGAACTCTAGGAAACATTCGCCTGATAGGTGAGCTTCTAAAACAGAAGATGGTACCTGAAAAGATTGTTCACCATATTGTTCTGGAGCTTTTGGGGCCTGACCCTAAAACATGCCCTGCTGAGGAGAACGTTGAGGCTATTAGTCAGTTTTTTAACACGATAGGTAAGCAACTGGATGAGAGCCCAAAATCTCGGCGAGTCAATGATTTGTACTTCAGCCGGTTGAAGGAGCTCACTGTAAACACCCAACTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAATAACTGGGTTCCTAGACGTGAAGAGGTTAAAGCAAAAACCATTACTGAAATTCATACAGAGGCTGAGAAAAATCTAGGGCTCCGTCCAGGTTCAGTTGCAATGATGAGAAATGGCCGTAATGCCGAGGCACTTGGGGGATTAAGCCCTGGTGGTTTTCCTGTTGCCCGACCTGGCTTTGGGGGTATGATGCCTGGAATGCCTGGAGCCAGGAAAATGCCCGGTATGCCTGGACTTGAGTCGGACAATTGGGAAGTTCCTAGATCTCGATCAATGCCAAGGGGCGAGAGTGGAGGTCATGCTCAGGCTTCTGCACGTGTCCAATCATCACTAATGGGCAAAACACCATCCATTAGTTCAAAATACTTACCTCAGGGAAGTGGTGGTGTAATTACAGGGAAAACAAGTGCCTTGCTACAAGGTAGTGCTGCGACATCTCCTGCCCGACCACCAAGTTCCATGCCTGTCGCTCTCAACCCTAAACCTGTTGCTCCGGTTGCACCTGTCGTATCTTCTCCTCAGAAGCCCGCAGTTCCTGCTACATCCAATTTAGCTGATCTTCAAAAGAAAACCGTTTCGCTGCTTGAGGAGTACTTCAGTGTACGGATTCTTGATGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCCTCAGCTTATCATCCTGAGGTTGTTAAAAAATCCCTTACCATGGCACTTGAGAAGATTCCACCACGCGTAGATCCAGTTGTTAAGCTTCTTGAGCACTTGCTTTGCAAGAATGTCTTGACTGCAAAGGATATAGGTACTGGGTGCTATCTATACGGTTCACAGATGGATGATATTGGCATCGATCTGCCAAAAGCGCCAAACAATTTTGGTGAGATTCTCGGGATGTTGATTTTGATCGGGGGTCTGGATTTCACAGTTGTGAAGGAGATCCTGGAGAAGCTGGAAGATAACTACTTCCAGAAATCCATATTTGATGGTGCTATGAAGACCCTCAAATCTAGTCCTTCTGGAGAAAGAATTCTTGCAACTCAAAGCGTTGAGGTCCAGGCATGTGAAACTTTACTTGCGTGA 2307 46.16 MQADQTVISLRPGGGGGLRGSRFVTPRFDSSSADSSSLRPHGGVASILKTGDLRFEGRERIQYTRDQLLQLREVATVPEDILKVKLEVESEIGGEDQTWNRAESNPQPQSQSRYFEPDSRDWRGRSGQVPGSTEEGPWDANKDMSGQSESRFQDSNNRIQVSGNQGVGTPALIKAEVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFASDVPGEKDITFKRVLLNICQEAFEGADNLRAEIRQMTSPEQEMERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDPKTCPAEENVEAISQFFNTIGKQLDESPKSRRVNDLYFSRLKELTVNTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHTEAEKNLGLRPGSVAMMRNGRNAEALGGLSPGGFPVARPGFGGMMPGMPGARKMPGMPGLESDNWEVPRSRSMPRGESGGHAQASARVQSSLMGKTPSISSKYLPQGSGGVITGKTSALLQGSAATSPARPPSSMPVALNPKPVAPVAPVVSSPQKPAVPATSNLADLQKKTVSLLEEYFSVRILDEALQCVEELKSSAYHPEVVKKSLTMALEKIPPRVDPVVKLLEHLLCKNVLTAKDIGTGCYLYGSQMDDIGIDLPKAPNNFGEILGMLILIGGLDFTVVKEILEKLEDNYFQKSIFDGAMKTLKSSPSGERILATQSVEVQACETLLA 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 870114 875548 - MELO3C016952.2.1 Cme07g00133 332149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00133 768 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 1 767 - -
Cme07g00133 768 MobiDBLite consensus disorder prediction 25 39 - -
Cme07g00133 768 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 767 IPR045208 GO:0003743
Cme07g00133 768 SUPERFAMILY ARM repeat 186 421 IPR016024 -
Cme07g00133 768 Pfam MA3 domain 603 714 IPR003891 -
Cme07g00133 768 SUPERFAMILY ARM repeat 599 754 IPR016024 -
Cme07g00133 768 MobiDBLite consensus disorder prediction 92 165 - -
Cme07g00133 768 Pfam MIF4G domain 193 418 IPR003890 GO:0003723|GO:0005515
Cme07g00133 768 MobiDBLite consensus disorder prediction 518 542 - -
Cme07g00133 768 ProSiteProfiles MI domain profile. 602 724 IPR003891 -
Cme07g00133 768 MobiDBLite consensus disorder prediction 97 115 - -
Cme07g00133 768 SMART ma3_7 603 715 IPR003891 -
Cme07g00133 768 MobiDBLite consensus disorder prediction 496 542 - -
Cme07g00133 768 MobiDBLite consensus disorder prediction 143 165 - -
Cme07g00133 768 SMART if4_15 193 418 IPR003890 GO:0003723|GO:0005515
Cme07g00133 768 MobiDBLite consensus disorder prediction 1 44 - -
Cme07g00133 768 Gene3D - 184 419 - -
Cme07g00133 768 Gene3D - 599 760 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00346 Cme-Chr6:2143098 Cme07g00133 Cme-Chr7:870114 8.23E-06 dispersed
Cme12g01630 Cme-Chr12:23454586 Cme07g00133 Cme-Chr7:870114 1.12E-06 transposed
Cme02g01042 Cme-Chr2:15353771 Cme07g00133 Cme-Chr7:870114 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00133 K03260 - csv:101211356 1356.27