Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00146 ATGGCGAAAACGGCGTCGTTTAACTACACATGCAAGTCGTTTTTAGTCTTTCTGGCTTTGTCTTTTCCGGCGACAACGGTGGCATTGTCCTTCGGATTTTACGCCGCCACGTGTCCCGCCGCGGAGTTAATGGTTAGAAACACCGTCAGATCGGCTTCCTCCGTTGACCCCACCGTCCCCGGCAAGCTCCTCCGGTTGCTATTCCATGACTGTTTTGTCGAGGGATGTGATGCTTCTGTATTGGTGGAAGGAAATGGAACGGAACGAAGCGACCCGGCAAACAAGTCACTTGGAGGATTCGAAGTAATCGATTCAGCTAAGAGAACTTTAGAAATTTTTTGTCCTGGAACTGTTTCCTGTGCTGACATTGTTGTTTTAGCCGCCAGAGATGCAGTTGAATTCACCGGTGGGCCCTCCGTTGAAGTCCCGACCGGCCGGAGAGACGGAAAGATATCGGCGGCGTCAAACGTCCGGCCAAACATCGCCGACACAAGCTTTTCAGTCAACCAAATGATGAATCTCTTCTCATCAAAAGGACTGTCGGTGGACGATCTTGTCATCCTCTCCGGGGCCCACACCATCGGAACCTCCCACTGCAGCGCCTTCAGCGACCGCTTCCGACGAAACCCAAACGGCCAACTGACCCTCATCGACGCCTCTCTTGACGGGTCCTACGCCGACGAGCTCATGCGGCGTTGCCCCGCCGGCGCCGCCACTGCCGCAACCGTCGAAAATGATCCGGCGACGGCGTTTGTCTTCGACAATCAGTATTACAGAAACATTTTGTCACACAAAGGGCTGTTACAATCGGATTCCGTTCTGATCAGCGACGGCCGGACTAGAGCTCGGGTGGAGAGCTTCGCGAACGATCAGATTGGGTTTTTTGAAAACTGGGCCCAGTCGTTCTTGAAACTTAGTAGTATTGGAGTTAAAAGTGGGGATGAAGGAGAGATTAGGTTGTCTTGTTCTACGGTTAATGTTTGA 984 52.44 MAKTASFNYTCKSFLVFLALSFPATTVALSFGFYAATCPAAELMVRNTVRSASSVDPTVPGKLLRLLFHDCFVEGCDASVLVEGNGTERSDPANKSLGGFEVIDSAKRTLEIFCPGTVSCADIVVLAARDAVEFTGGPSVEVPTGRRDGKISAASNVRPNIADTSFSVNQMMNLFSSKGLSVDDLVILSGAHTIGTSHCSAFSDRFRRNPNGQLTLIDASLDGSYADELMRRCPAGAATAATVENDPATAFVFDNQYYRNILSHKGLLQSDSVLISDGRTRARVESFANDQIGFFENWAQSFLKLSSIGVKSGDEGEIRLSCSTVNV 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 928884 931921 + MELO3C016943.2.1 Cme07g00146 332162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00146 327 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PANTHER PEROXIDASE 18-RELATED 22 325 - -
Cme07g00146 327 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PANTHER PEROXIDASE 25-RELATED 22 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 Gene3D - 32 326 - -
Cme07g00146 327 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme07g00146 327 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
Cme07g00146 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cme07g00146 327 Gene3D Peroxidase, domain 2 162 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00146 Cme-Chr7:928884 Cme03g01528 Cme-Chr3:24448350 1.65E-82 dispersed
Cme12g00272 Cme-Chr12:3151422 Cme07g00146 Cme-Chr7:928884 9.78E-18 dispersed
Cme07g00146 Cme-Chr7:928884 Cme12g01717 Cme-Chr12:23962345 2.37E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00146 K00430 K18328 csv:101211842 622.854