Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00174 ATGAAGTATGTGAAGAGGGCAGCCATGGCATTTCTTGTTGAGCTTGTTATCCTGGCTTTTCTTTTCTGTGCTACCGTTGGTGTGGTGGACTCTGATGATGGAGCAACGTTGTTGGAGATAAAGAAATCATTCAGGGATGTGGATAATGTTCTTTATGATTGGACAAGCTCACCTTCTTCAGATTTCTGTGTATGGAGAGGTGTCACCTGTGACAATGCCACTCTCAATGTTATCTCTCTTAATCTTTCAGGTCTCAATCTGGATGGAGAAATTTCTCCTTCAATCGGGAACCTCAAAAGCCTGCAAACTCTGGATTTGAGAGGGAATGGTCTTTCTGGGCAAATTCCAGATGAGATTGGTGATTGTTCTTCGTTAATAAACATGGATTTATCGTTTAATGAGATTTATGGAGACATACCATTTTCCATTTCGAAGTTGAAGCAGCTGGAAATGCTTGTTCTGAAAAATAATAGACTGATTGGACCAATCCCGTCGACCTTATCTCAGATTCCAAATTTGAAGGTCTTAGATTTGGCACAGAATAATCTTAGTGGGGAGATACCAAGACTAATATACTGGAATGAAGTGCTGCAATATCTTGGTTTGCGTGGTAACAATTTGGTGGGCACACTCTCTCCAGACATGTGCCAGCTGACTGGTTTATGGTATTTTGATGTGAGAAATAACAGTCTAACTGGCAGCATACCTCAAACAATAGGCAACTGCACAGCCTTCCAGGTCTTGGACCTGTCATACAATCATCTCAGTGGAGAGATACCATTTAACATTGGTTTCCTTCAAGTAGCCACATTGTCCTTACAGGGTAATCAGCTATCAGGTCCTATTCCACCTGTAATTGGTCTGATGCAGGCGCTTGCTGTGTTAGATTTGAGCTGCAACATGTTAACCGGTTCGATCCCCTCTATCTTAGGGAATCTGACTTATACCGAGAAGTTGTACCTGCATAGTAATAAGCTCACTGGGCCTATTCCGCCGGAGCTAGGGAATATGACGAAGCTCCATTATCTAGAATTGAATGATAATCATCTTGCTGGGAATATTCCAGCTGAGCTCGGGAAACTCACCGATTTGTTTGATCTAAATGTAGCTAATAACAATCTCGGAGGGCCAATCCCTGACAATCTTAGCTCTTGCACAAATCTCAACAGCCTAAATGTGCATGGCAACAAGTTGAATGGAACTATTCCCCCATCTTTCCAGAGGCTAGAGAGTATGACTTACTTGAATCTTTCCTCAAATGATCTACGAGGTCCTATACCAGTTGAGCTGTCTCGTATTGGCAACTTGGATACATTAGACATTTCAAATAACAAAATTAGTGGCACAATTTCTTCATCCTTTGGCGATCTGGAACATCTTCTAAAGCTAAATTTAAGTAGGAATCATTTAACGGGATTCATTCCAGCTGAATTTGGCAATTTAAGGAGTGTCATGGAAATAGATATTTCACACAACCAGCTCTCTGGGTTCATTCCTCAAGAACTGAGTCAACTTCAAAATCTTCTCTCCTTGAGACTTGAGAACAACAATTTATCTGGGGATCTTACGTCACTGATTAGCTGCCTAAGTCTTACAGAATTAAACGTATCTTATAACAATCTAGCTGGTGACATTCCCACAAGCAACAACTTCTCCAGGTTTTCATCTGATAGTTTCCTTGGAAATATTGCTCTCTGTGGATATTGGAATAGCAACAACTACCCCTGTCATGAAGCTCATACGACAGAGAGAGTCACCATATCTAAAGCCGCTATCCTGGGAATTGCTCTTGGTGCCCTTGTAATCTTGTTAATGATCCTTCTAACAGTGTGTCGTCCGAACAACACAATACCTTTTCCAGATGGATCACTTGACAAACCAGTTACTTACTCAACTCCTAAGCTAGTAATCCTTCACATGAATATGGCCCTTCACGTTTATGAGGACATTATGAGGATGACTGAAAATTTGAACGAAAAGTACATTATTGGATATGGAGCTTCAAGCACAGTCTACAAATGTGTACTGAAGAACTGTAAACCCGTGGCTGTCAAAAAGCTATACTCTCACCAGCCCCATAGCATGAAGGGGTTCGAGACCGAACTGGAAACCGTGGGTAGCATCAAACACAGAAATCTAGTCAGCCTCCAAGGATACTCCTTATCCCCCTCTGGGAATCTCCTCTTTTATGACTACATGGAAAACGGCAGTCTCTGGGATCATCTACATGGCTCTGGCTCTACTAAGAAGAAAAAGCTTGACTGGGACACTCGGCTCAATATTGCACATGGAGCAGCTCAGGGACTGTCATATCTACACCATGATTGTAGCCCTCGCATTATCCACAGGGATGTTAAGTCATCTAACATTCTATTGGACAAGGATTTTGAAGCCCATCTCACTGATTTTGGTATTGCCAAGAGTTTGTGCACCTCAAAGACATATACGTCCACTTATATCATGGGAACTATTGGATACATTGATCCAGAGTATGCTCGGACTTCCCGACTTACTGAAAAGTCCGATGTTTACAGCTTTGGCATTGTGTTGCTTGAATTGCTCACAGGAAGGAAAGCAGTGGACAATGAATCAAATCTCCACCAATTGATCTTGTCAAAAACAGCCAACAATGCTGTAATGGAGACAGTTGATCCTGAAATAACTGCAACTTGCAAGGACCTTGGAGCTGTCAAGAAGGCATTTCAGCTAGCTCTCCTTTGCACAAAGAGGCAACCATCTGATCGACCAACAATGCACGAAGTAACACGCGTTATTGGAAGTCTTCTACCCTCTGCCGCAACACCAAAACAAACACCAACCATAACAACCATTCCCCCATCTGCAAAATCCTCTTGCTACAAGGATGAGTATGCAAATCTGAAGACGCCGCATGTGCTGAACTGCCCAACCATGAGCACCTCAGACGCCCAGCTCTTCGTCAAGTTTGGAGAGGTAATATCACAAAACAGTGAGTAA 2976 42.44 MKYVKRAAMAFLVELVILAFLFCATVGVVDSDDGATLLEIKKSFRDVDNVLYDWTSSPSSDFCVWRGVTCDNATLNVISLNLSGLNLDGEISPSIGNLKSLQTLDLRGNGLSGQIPDEIGDCSSLINMDLSFNEIYGDIPFSISKLKQLEMLVLKNNRLIGPIPSTLSQIPNLKVLDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGTLSPDMCQLTGLWYFDVRNNSLTGSIPQTIGNCTAFQVLDLSYNHLSGEIPFNIGFLQVATLSLQGNQLSGPIPPVIGLMQALAVLDLSCNMLTGSIPSILGNLTYTEKLYLHSNKLTGPIPPELGNMTKLHYLELNDNHLAGNIPAELGKLTDLFDLNVANNNLGGPIPDNLSSCTNLNSLNVHGNKLNGTIPPSFQRLESMTYLNLSSNDLRGPIPVELSRIGNLDTLDISNNKISGTISSSFGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMEIDISHNQLSGFIPQELSQLQNLLSLRLENNNLSGDLTSLISCLSLTELNVSYNNLAGDIPTSNNFSRFSSDSFLGNIALCGYWNSNNYPCHEAHTTERVTISKAAILGIALGALVILLMILLTVCRPNNTIPFPDGSLDKPVTYSTPKLVILHMNMALHVYEDIMRMTENLNEKYIIGYGASSTVYKCVLKNCKPVAVKKLYSHQPHSMKGFETELETVGSIKHRNLVSLQGYSLSPSGNLLFYDYMENGSLWDHLHGSGSTKKKKLDWDTRLNIAHGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHQLILSKTANNAVMETVDPEITATCKDLGAVKKAFQLALLCTKRQPSDRPTMHEVTRVIGSLLPSAATPKQTPTITTIPPSAKSSCYKDEYANLKTPHVLNCPTMSTSDAQLFVKFGEVISQNSE 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1142574 1151044 - MELO3C016916.2.1 Cme07g00174 332190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00174 991 Gene3D Ribonuclease Inhibitor 194 267 IPR032675 -
Cme07g00174 991 ProSiteProfiles Leucine-rich repeat profile. 172 194 IPR001611 GO:0005515
Cme07g00174 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Cme07g00174 991 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Cme07g00174 991 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515
Cme07g00174 991 Pfam Leucine rich repeat 367 422 IPR001611 GO:0005515
Cme07g00174 991 SUPERFAMILY RNI-like 211 547 - -
Cme07g00174 991 ProSiteProfiles Protein kinase domain profile. 657 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00174 991 SUPERFAMILY L domain-like 31 266 - -
Cme07g00174 991 Gene3D Phosphorylase Kinase; domain 1 639 732 - -
Cme07g00174 991 SMART serkin_6 657 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00174 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 12 977 - -
Cme07g00174 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 977 - -
Cme07g00174 991 SMART LRR_typ_2 218 242 IPR003591 -
Cme07g00174 991 SMART LRR_typ_2 289 312 IPR003591 -
Cme07g00174 991 SMART LRR_typ_2 170 194 IPR003591 -
Cme07g00174 991 SMART LRR_typ_2 457 480 IPR003591 -
Cme07g00174 991 SMART LRR_typ_2 98 122 IPR003591 -
Cme07g00174 991 SMART LRR_typ_2 337 361 IPR003591 -
Cme07g00174 991 SMART LRR_typ_2 409 433 IPR003591 -
Cme07g00174 991 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Cme07g00174 991 ProSitePatterns Protein kinases ATP-binding region signature. 663 686 IPR017441 GO:0005524
Cme07g00174 991 Gene3D Ribonuclease Inhibitor 268 577 IPR032675 -
Cme07g00174 991 SUPERFAMILY Protein kinase-like (PK-like) 635 923 IPR011009 -
Cme07g00174 991 CDD STKc_IRAK 663 928 - -
Cme07g00174 991 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Cme07g00174 991 Pfam Protein kinase domain 659 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00174 991 Gene3D Transferase(Phosphotransferase) domain 1 733 940 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00174 Cme-Chr7:1142574 Cme10g01766 Cme-Chr10:25121562 0 dispersed
Cme10g01191 Cme-Chr10:12091673 Cme07g00174 Cme-Chr7:1142574 1.78E-07 dispersed
Cme07g00174 Cme-Chr7:1142574 Cme06g00412 Cme-Chr6:2644766 2.64E-75 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64994 PF00069 Pkinase 7.80E-46 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00174 K20718 - csv:101214398 1885.54