Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00182 ATGATGGATGTGAACATCAGTAATCCTTCAAAAGTTGTTCCAAGAAGTTCGTTTCCAAAGGAGAGTGAAGATGGAGGTCAATTTGTGGTTGAGCTTAGCAGCATTGAAAACGGATGCTCTGTTCCAGAGCAAAACCTCGGTTCACAAACCAACGAGTTTATTGATTCTAGCATTAGCTATGACAATGATTCACAACTCGCAAATAAGCCTCAGAATATCCCAAGTTCAAATGGAAACCTGACACTAAGAAGAGCAATCCTTTCGAAATCCAAATCCAGATTTGGAGTACAGCCAGTTTATACCGATTCAAACATGTGCGAGGAGGAGAATTATCCGTCATCAAGAGAGCAAATTGGGGAAACTTCATCGAGAAGCTTTACTCACAATACGCAGAAGGCCACACCTGAGAGAAAAGATGAGAAGCACAAGAAAGTGAAGGTGAAGACAGTGATTAAGTGGATTGGAGTTTTTTGCATAATTAGTTGCTTGGTGGCTAGCTTGACTGTTGACCCTTTGAAGAATCGCTTCCTTTGGGGTTTAAAGGTCTGGAAATGGTGTTTACTTGCTACTGTGATTTTGTGTGGATTGTTATTTACTCGTTGGGTTATGAATGTGGTTGTCTTTTTGATAGAGAAGAACTTTTTGCTTAAGAAAAAAGTACTTTATTTTGTTCATGGGTTGAAGAAGAGTGTCCAAGTTACCCTTTGGTTGACATTGGTTTTTGCTACATGGGAGTCACTGTTTGATCGAAGAAACCATACGGTTTCGAATTCAAGGATCACTTCTAAGGTTTTAGATTTTGTTACGTGGACTTTGGTAAGCCTTCTTATAGGGGCATTCCTGTGGTTGATTAAAACATTGTTGCTGAAAATACTGGCCTCCAAGTTCCATATGAACCGATTTTTCGACAGAATACAGGAATCCCTTTTCCATCATCATATTCTACAAATGCTCTTGATGGCTCGTACGCAGGAGGATGAAAGTTATGCCGAGTTCAGATGTTGTCGATTTCCTTCTGAGAGTAAAAAATCAGACTGTCAAAAGGTGATTGACATAGAAAAGATTCACCAGCTGAAGCGAGAGAAGGTTTCAGCTTGGAAAATGAAGACATTGGTTGATGCAGTTACTAGTTCAGAGATGTCAATATCAAAAGCACTCGATGAAAGCTACCGAAATGCTGCTGATGGTGAGATCACAGACGAGATGAAAGTTGCCAAACAAGCTGCTAAGAAGATCTTCAAAAATGTTGCTCCTGGAAAGAAGTTCCTAGAGGAGAAGGATCTTCTAAAATTCATGATCGATGAAGCCGAAGTTAATCTTCTGTGGCCACACTTTGAGGTAGATAAGACAAAGAAGATTGACATGAAAGCCCTAACAAATTGGGTGGTGAAGGTTTATCAAGGGAGGAAAACTCTAGCACATGCCTTGAAAGACACTAAAACAGCGGTGAAGCAATTGGATAATTTAGTAGCAGCGCTTATTGTAATAGTAACAGCTGTTATTTGGCTTCTGTTGATGGAAATTGCTACAACCAAAGTACTCGTCTTCCTTCTAACTCAGTTTGCAGTGGCAGCTTTCATGTTTGGAAACACTTGCAAGAATACATTTGAAGGTCTAATCTTTGTGTTTGTGATGCATCCATTTGATGTTGGGGATCTTTGTGTTGTAGATGGCATCCAGCTGTTGGTTGAAGAAATGAACATCTTGACAACAGTCTTCTTGAAACTCAACAATGAGAAGGTGTACTATCCCAACTCAGTTTTGGCTACGAAACCCATCACTAACTACTACAGAAGTCCAGACATGGGTGACACCATCGAATTCTCAATCAGTTTCACGACACCATTGGAGAAGATTGGGATCATGAAAGAAAAAATAAAGAGGTATTTGGAAGATAATCCACAACACTGGTACCCAAATCACAGTGTGGTGGTGAAGGAGATCGAAAATGTGAATAAGATAAAGATCGCTCTTTATACAAACCACACCATGAATTTTCAAGATTGGACTGAGAAGAACCGACGAAGAACAGAGCTCATGATGGAGTTAAAGAGAATTTTTGAAGAACTGAAGATCAACTACAATCTTCTGCCTCAAACAGTTCATCTCTTCCCAACGCACTGA 2124 39.88 MMDVNISNPSKVVPRSSFPKESEDGGQFVVELSSIENGCSVPEQNLGSQTNEFIDSSISYDNDSQLANKPQNIPSSNGNLTLRRAILSKSKSRFGVQPVYTDSNMCEEENYPSSREQIGETSSRSFTHNTQKATPERKDEKHKKVKVKTVIKWIGVFCIISCLVASLTVDPLKNRFLWGLKVWKWCLLATVILCGLLFTRWVMNVVVFLIEKNFLLKKKVLYFVHGLKKSVQVTLWLTLVFATWESLFDRRNHTVSNSRITSKVLDFVTWTLVSLLIGAFLWLIKTLLLKILASKFHMNRFFDRIQESLFHHHILQMLLMARTQEDESYAEFRCCRFPSESKKSDCQKVIDIEKIHQLKREKVSAWKMKTLVDAVTSSEMSISKALDESYRNAADGEITDEMKVAKQAAKKIFKNVAPGKKFLEEKDLLKFMIDEAEVNLLWPHFEVDKTKKIDMKALTNWVVKVYQGRKTLAHALKDTKTAVKQLDNLVAALIVIVTAVIWLLLMEIATTKVLVFLLTQFAVAAFMFGNTCKNTFEGLIFVFVMHPFDVGDLCVVDGIQLLVEEMNILTTVFLKLNNEKVYYPNSVLATKPITNYYRSPDMGDTIEFSISFTTPLEKIGIMKEKIKRYLEDNPQHWYPNHSVVVKEIENVNKIKIALYTNHTMNFQDWTEKNRRRTELMMELKRIFEELKINYNLLPQTVHLFPTH 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1211909 1216913 - MELO3C016908.2.1 Cme07g00182 332198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00182 707 MobiDBLite consensus disorder prediction 1 24 - -
Cme07g00182 707 MobiDBLite consensus disorder prediction 106 139 - -
Cme07g00182 707 Gene3D - 547 596 IPR023408 -
Cme07g00182 707 MobiDBLite consensus disorder prediction 1 15 - -
Cme07g00182 707 Pfam Mechanosensitive ion channel 488 693 IPR006685 GO:0016020|GO:0055085
Cme07g00182 707 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 10 85 703 - -
Cme07g00182 707 SUPERFAMILY Sm-like ribonucleoproteins 536 596 IPR010920 -
Cme07g00182 707 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 85 703 IPR016688 -
Cme07g00182 707 MobiDBLite consensus disorder prediction 106 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00182 Cme-Chr7:1211909 Cme07g00187 Cme-Chr7:1268851 0 dispersed
Cme07g00182 Cme-Chr7:1211909 Cme07g00186 Cme-Chr7:1260419 0 proximal
Cme02g00283 Cme-Chr2:2367651 Cme07g00182 Cme-Chr7:1211909 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00182 K22048 - csv:101217429 1259.97