Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00217 ATGGATAATCTTTTTCAATCAATGGTGGCGAGTGTGCCTATGGGAGTGGGTACGATATTGTTCACGACGTTTTGCCTCGTAGGAGGGGGTTTGGTTTATTTCTATGGACCGTACTGGGGAGTGAGAAGGGTGCCTGGTCCACCAGCTATTCCGCTGGTCGGACACCTTCCCTTGCTGGCTAAGTACGGCCCAGACGTTTTCTCTGTCCTCGCCTCCCAATATGGTCCTATCTTCAGGTTCCATATGGGTAGACAGCCATTGATAATTATAGCAGACCCTGAGCTTTGTAAAGAAGTTGGTATCAAGAAATTCAAGGACATCTCAAACAGAAGTGTCCCTTCTCCAATATCAGCTTCCCCGCTTCATCAGAAAGGTCTTTTCTTCACAAGGGATGCAAGATGGTCGACAATGCGAAACACAATACTCTCAGTCTATCAGCCCTCTCATCTAACGAGATTAATACCCACTATGCAATCAATCATCGAAACTGCAACTCAAAATCTCCATTCCTCTGTCGAGGAAGATATCCCTTTCTCTAATCTCTCCCTTAAATTGACCACCGATGTTATTGGAACAGCAGCCTTCGGTGTCAACTTTGGGCTCTCTAATCCACATGCAACCAAAACCTGTGGTACCAATGACCAAGACAGTAAAAATGATGAAGTTTCGGACTTCATCAATCAACATATCTACTCCACAACGCAGCTCAAGATGGATTTATCGGGTTCCTTCTCAATCATTTTGGGACTTCTTGTCCCTGTACTCCAAGAGCCATTTAGACAAGTCCTGAAGAGAATACCATTCACCATGGACTGGAAAGTTGACCGGACAAATCAGAAGTTGAGTGGTAGACTTAATGAGATTGTGGACAAGAGAATGAAATGTAACGATCGAGGTTCGAAAGATTTCTTATCACTCATTTTGAGAGCAAGAGAGTCAGAGACGGTATCAAGGAATGTCTTCACTCCAGACTACATCAGTGCAGTCACGTACGAACACCTACTTGCTGGGTCAGCTACGACAGCATTCACATTGTCTTCTGTTGTATATTTAGTTGCTGGACATCCAGAAGTCGAGAAGAAATTGCTTGAAGAGATTGACAACTTTGGTCCATCAGATCAGATACCAACAGCTAATGATCTTCAGCAGATGTTTCCATATCTTGATCAGGTGATTAAAGAGTCCATGAGGTTCTACACTGTTTCCCCTCTAGTAGCTAGAGAGACATCTAAAGATGTGGAGATTGGTGGATATCTTCTTCCAAAGGGGACATGGGTTTGGTTAGCACTTGGAGTTCTTGCCAAGGATCCAAAGAACTTTCCAGAACCAGATAAATTTAAGCCAGAAAGGTTTGATCCAAATGAGGAAGAGGAGAAACGAAGGCATCCCTATGCTTTAATCCCATTTGGAATTGGTCCTCGAGCATGCATTGGTCAAAAATTTGCCCTTCAGGAATTGAAGCTCTCTTTGATTCATTTGTATAGGAAGTTTGTATTTCGGCATTCCCTCTCCATGGAACAACCTCTTGAACTTGAGTATGGTGTCATTCTCAACTTCAAAAATGGTGTCAAGCTCAGAGTGATCAACCGTAAATAG 1596 43.36 MDNLFQSMVASVPMGVGTILFTTFCLVGGGLVYFYGPYWGVRRVPGPPAIPLVGHLPLLAKYGPDVFSVLASQYGPIFRFHMGRQPLIIIADPELCKEVGIKKFKDISNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLTRLIPTMQSIIETATQNLHSSVEEDIPFSNLSLKLTTDVIGTAAFGVNFGLSNPHATKTCGTNDQDSKNDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPVLQEPFRQVLKRIPFTMDWKVDRTNQKLSGRLNEIVDKRMKCNDRGSKDFLSLILRARESETVSRNVFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHPEVEKKLLEEIDNFGPSDQIPTANDLQQMFPYLDQVIKESMRFYTVSPLVARETSKDVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPNEEEEKRRHPYALIPFGIGPRACIGQKFALQELKLSLIHLYRKFVFRHSLSMEQPLELEYGVILNFKNGVKLRVINRK 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1430529 1434964 - MELO3C016879.2.1 Cme07g00217 332233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00217 531 PANTHER CYTOCHROME P450 FAMILY PROTEIN 16 530 - -
Cme07g00217 531 Pfam Cytochrome P450 45 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Cme07g00217 531 Gene3D Cytochrome P450 35 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PANTHER THROMBOXANE-A SYNTHASE 16 530 - -
Cme07g00217 531 SUPERFAMILY Cytochrome P450 37 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme07g00217 531 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00217 Cme-Chr7:1430529 Cme04g00654 Cme-Chr4:6652981 3.07E-35 dispersed
Cme07g00217 Cme-Chr7:1430529 Cme04g02217 Cme-Chr4:29362209 3.56E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00217 K20771 - csv:101209772 1040.8