Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme07g00228 ATGTCGAAAATGAAACATCTTCTTCGAAAGCTTCACATCGGTGGAGGACTTAACGAGCATCAGCGATTGAGCGATGCTCGACCTGTAACACGACCAAGTTCGAGCCCCAGTCCAGGCCCAAGCCCCAATAGTAATCCATCGGGTTCGTCGTCATCTGGGTCTTCTTCGTCTTTGTCTATGGCGTCTTCTACTACAATGGGGAGATTGGAGGCTGTTGAATCAGTCGTTGATCCGGCGGCTTCTGGGGATGTTGTGGGCGGTGGTTGCGTGGATTTCAATGCCTTGGAAGAGGAGTTTCAGGTGCAATTGGCTATGGCGATTAGTGCTTCCGATCCTGATTCTAGACAAGATACTGAATCAGCTCAGATCGACGCTGCCAAGCGGATGAGTCTTGGCTGTTCGCCTTCAGTCTCCGGCAGTAAAGCCCTCGCTGAATTTCTCTCGCTTCAGTATTGGAGCTATAATGTTGTAAATTATGACGAGAAAGTGATGGATGGATTTTATGACTTATACGGCATTACTGCAAATTCTAGCACCCGTGGAAAGATGCCACTGTTAGTTGATCTTAAAGAGATATGTGTGACAAGTGATATTGATTATGAGGTGATTTTGGTAAATCGCTTGCTTGATCCTGAGCTTCAACAGCTGGAGAGACAAGCATATAACATATTCATGGAATGCAGAGTTTCTGAATATGGCTTCATTTTAAGTGGCCTGGTTCAAAAAATTGCTGATATGGTTGTTGCTAGAATGGGTGGTCCTGTTGGTGATGCTGAAGAAATGTTGAGAAGGTGGACCCGCAGGAGTTATGAGATGCGTAGTTCTCTGAACACTATTATTCTACCACTTGGTCGTCTTGATATTGGACTTGCACGTCATAGAGCCTTGCTTTTTAAGGTGCTAGCTGATAGGATTAATCTTCCATGCATACTTGTCAAAGGAAGCTACTACACTGGTACTGATGACGGAGCTGTGAACATGATCAAAATTGATAATGGAAGTGAATATATTATTGATCTTATGGGTGCTCCAGGCACGTTAATTCCCTCAGAGGCGCCCAGCTGTCAATTTTCGAATTATGGATTTGATAGAAGGCCAGCAGATGTTATAGAAGTTCCTGAAGATACACCAACATTACAAAATGATGGAGTCGAAGCAGTGTCAATTTCATCTACTCAAGATGAAGTAGCAAATGTTTGCAACTTAATATCCAAAGAAGCTTCAGATTTAGATGCTCAATCAAAAGAAAATATTAGGAACTTTATTGAAGAAATTCAAAGTGGGAGTTCCGTTTATGATTTTGCAAAGCTTCTAGAATCAGAAAGCAGTGCCTGTGAAAGTTCATTGGGAGCATTTGCACAGTCTGCTTCTGCACAAAAGAAGAAAGTGAAAAAAGTGTCTAAATATGTCATAAGTGCTGCAAAGAACCCAGAGTTTGCTCAGAAATTACATGCTGTCTTGTTAGAGAGTGGTGCATCACCTCCTGCAGATTTGTTTTCAGATATAGAATCGCAGGACAACGGTGAAAGGAAAGAAACTTTTCAAATGTATCCAATCAATGGAAAAGGGATCGATGTTGGGATCCAGAGCCACTCCTATATTTTAGCAAGCCACGGACAGTCTTCTGCTACTTCTACTGAAGCGGAGTATTTGAACAATGTTGTCCATGAAAATAAGCAGAAAGTGTCTTCTGGGGGATTGTCTCAAGAACAAACGGCCAATACAAATGCTAACAACCACAGCATTTTTTGGCCTCACAGTATGAAAAACGAGGGATTTGTGTTTGTCGATGCTAATGGTGAAGCAGGAAAATTGGTTGATGTTAATGGAACTTTTCATCGTGAACATATGGATGGTGTTTCATTGACATCTGATGCCGACTCTCATAAGAAACTAGGAAGTGCCTTAGTGAGTGAAGAAAGAAGATTGTTGCAAGATAAGAACAGTGGAAGTCTTCAATGCTTTGATTTATGTGAAAAGCCACTTGAAAATTTGTTAGAAACCGATGATAGTAAACTGCATGCTAGTGATGAGCACAATGAGACAATTAACCCAATATTAGGTGAAGTTGCAGAATGGGAAATTCCTTGGGAGGATCTTCACATTGGTGAACGTATTGGTATTGTTTTTGGAATGAAGAATAATGGTTTTCTTTGTATCCCAGGCTCATATGGCGAGGTTTATCGAGCAGATTGGAATGGCACTGAAGTTGCTGTGAAGAAGTTCTTGGATCAAGATTTTTCTGGTGCTGCTTTGGTTCAATTAAAATGTGAAGTTGAAATCATGTTAAGGCTGAGGCATCCTAACGTTGTCCTTTTCATGGGCGCTGTCACTCGCCCTCCTCATTTCTCTATCCTTACGGAGTTTCTTCCCAGGGGAAGTTTGTATAGGTTACTGCATCGGCCCAACTCTCAACTAGATGAAAGGAGACGATTGAAAATGGCTCTTGATGTGGCCAAAGGAATGAACTACTTGCACACAAGTCATCCGACCATTGTTCATAGAGATCTAAAGTCCCCCAATCTCCTTGTTGATAAAAACTGGGTTGTCAAGGTTTGCGATTTTGGTTTGTCTCGTGTGAAGCAGAATACATTTCTGTCTTCAAAGTCAACTGCTGGAACGCCTGAATGGATGGCACCAGAAGTTCTAAGGAATGAACCAGCCAATGAAAAGTGTGATGTGTATAGTTTTGGTGTAATATTGTGGGAGTTGACGACATGTCGCATACCGTGGAAAGGTTTGAACCCAATGCAGGTCGTAGGAGCTGTTGGATTCCAGAATAGGCGCCTGGAAATTCCACAAGATGTTGATCCAGCAGTTGCACAGATCATTTGCGATTGTTGGCAAACGGACTCACAATTGAGGCCGTCGTTTTCTCAGCTTATTAGTCGATTGCGGCGCCTGCAACGGCTTGTTCAGAAAACAGACTCCAGGAATCAAATACCGGATAAAGTTTGGAAAACACAACTGAATAGGGAAGGTGCTAGTTCATTCAAAGTGGGGGCTGAGCACAAACCTATTTAG 3024 42.36 MSKMKHLLRKLHIGGGLNEHQRLSDARPVTRPSSSPSPGPSPNSNPSGSSSSGSSSSLSMASSTTMGRLEAVESVVDPAASGDVVGGGCVDFNALEEEFQVQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPSVSGSKALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITANSSTRGKMPLLVDLKEICVTSDIDYEVILVNRLLDPELQQLERQAYNIFMECRVSEYGFILSGLVQKIADMVVARMGGPVGDAEEMLRRWTRRSYEMRSSLNTIILPLGRLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKIDNGSEYIIDLMGAPGTLIPSEAPSCQFSNYGFDRRPADVIEVPEDTPTLQNDGVEAVSISSTQDEVANVCNLISKEASDLDAQSKENIRNFIEEIQSGSSVYDFAKLLESESSACESSLGAFAQSASAQKKKVKKVSKYVISAAKNPEFAQKLHAVLLESGASPPADLFSDIESQDNGERKETFQMYPINGKGIDVGIQSHSYILASHGQSSATSTEAEYLNNVVHENKQKVSSGGLSQEQTANTNANNHSIFWPHSMKNEGFVFVDANGEAGKLVDVNGTFHREHMDGVSLTSDADSHKKLGSALVSEERRLLQDKNSGSLQCFDLCEKPLENLLETDDSKLHASDEHNETINPILGEVAEWEIPWEDLHIGERIGIVFGMKNNGFLCIPGSYGEVYRADWNGTEVAVKKFLDQDFSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDERRRLKMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTCRIPWKGLNPMQVVGAVGFQNRRLEIPQDVDPAVAQIICDCWQTDSQLRPSFSQLISRLRRLQRLVQKTDSRNQIPDKVWKTQLNREGASSFKVGAEHKPI 1007
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 1500074 1509687 + MELO3C016868.2.1 Cme07g00228 332244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme07g00228 1007 MobiDBLite consensus disorder prediction 11 64 - -
Cme07g00228 1007 SMART serkin_6 722 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00228 1007 ProSiteProfiles Protein kinase domain profile. 713 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme07g00228 1007 MobiDBLite consensus disorder prediction 44 64 - -
Cme07g00228 1007 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 83 980 - -
Cme07g00228 1007 PRINTS Tyrosine kinase catalytic domain signature 873 883 IPR001245 GO:0004672|GO:0006468
Cme07g00228 1007 PRINTS Tyrosine kinase catalytic domain signature 787 800 IPR001245 GO:0004672|GO:0006468
Cme07g00228 1007 PRINTS Tyrosine kinase catalytic domain signature 936 958 IPR001245 GO:0004672|GO:0006468
Cme07g00228 1007 PRINTS Tyrosine kinase catalytic domain signature 892 914 IPR001245 GO:0004672|GO:0006468
Cme07g00228 1007 PRINTS Tyrosine kinase catalytic domain signature 826 844 IPR001245 GO:0004672|GO:0006468
Cme07g00228 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Cme07g00228 1007 SUPERFAMILY Protein kinase-like (PK-like) 722 976 IPR011009 -
Cme07g00228 1007 Pfam Ethylene-responsive protein kinase Le-CTR1 144 348 - -
Cme07g00228 1007 Gene3D Transferase(Phosphotransferase) domain 1 791 1002 - -
Cme07g00228 1007 Gene3D Phosphorylase Kinase; domain 1 693 790 - -
Cme07g00228 1007 PANTHER SERINE-THREONINE PROTEIN KINASE 83 980 - -
Cme07g00228 1007 CDD STKc_MAP3K-like 722 965 - -
Cme07g00228 1007 Pfam Protein tyrosine and serine/threonine kinase 722 965 IPR001245 GO:0004672|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00166 Cme-Chr2:1237800 Cme07g00228 Cme-Chr7:1500074 1.60E-70 dispersed
Cme07g00228 Cme-Chr7:1500074 Cme12g01838 Cme-Chr12:24732892 5.35E-82 dispersed
Cme07g00228 Cme-Chr7:1500074 Cme04g02435 Cme-Chr4:30989682 1.26E-31 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64998 PF07714 PK_Tyr_Ser-Thr 1.00E-62 CL0016 Cme PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme07g00228 K04424 - csv:101214554 1775.37